GapMind for catabolism of small carbon sources

 

Protein WP_011613157.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011613157.1

Length: 303 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-arginine catabolism speB lo agmatinase (EC 3.5.3.11) (characterized) 37% 93% 155.2 N(1)-aminopropylagmatine ureohydrolase; Protein SpeB homolog; EC 3.5.3.24 33% 183.0
L-arginine catabolism speB hi speB: agmatinase (EC 3.5.3.11) (TIGR01230) 98% 290.4 N(1)-aminopropylagmatine ureohydrolase; Protein SpeB homolog; EC 3.5.3.24 33% 183.0
L-arginine catabolism rocF lo Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; EC 3.5.3.1; EC 3.5.3.11 (characterized) 31% 60% 98.2 N(1)-aminopropylagmatine ureohydrolase; Protein SpeB homolog; EC 3.5.3.24 33% 183.0

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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