GapMind for catabolism of small carbon sources

 

Protein WP_011614209.1 in Trichodesmium erythraeum IMS101

Annotation: NCBI__GCF_000014265.1:WP_011614209.1

Length: 276 amino acids

Source: GCF_000014265.1 in NCBI

Candidate for 3 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-mannose catabolism TM1749 lo TM1749, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (characterized) 37% 74% 151 Putative phosphonates utilization ATP-binding protein PhnK 52% 235.0
D-mannose catabolism TM1750 lo TM1750, component of Probable mannose/mannoside porter. Induced by beta-mannan (Conners et al., 2005). Regulated by mannose-responsive regulator manR (characterized) 35% 70% 140.6 Putative phosphonates utilization ATP-binding protein PhnK 52% 235.0
D-cellobiose catabolism cbtD lo CbtD, component of Cellobiose and cellooligosaccharide porter (characterized) 33% 70% 120.9 Putative phosphonates utilization ATP-binding protein PhnK 52% 235.0

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000014265.1

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