Alignments for a candidate for hisE in Cereibacter sphaeroides ATCC 17029

Align phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (characterized)
to candidate WP_011840918.1 RSPH17029_RS06510 phosphoribosyl-AMP cyclohydrolase

Query= BRENDA::Q8YH95
         (139 letters)



>NCBI__GCF_000015985.1:WP_011840918.1
          Length = 119

 Score =  115 bits (289), Expect = 2e-31
 Identities = 55/96 (57%), Positives = 69/96 (71%), Gaps = 2/96 (2%)

Query: 24  FDASGLITAIVTDARDGELLMVAHMNEEALRLTLETGIAHYWSRSRKTLWKKGETSGNLQ 83
           FDA+GLI A+  D   GE+LM+A MN EA+  T+ETG   YWSRSR+  W KGETSG++Q
Sbjct: 10  FDANGLIPAVAQDHATGEVLMMAWMNAEAVARTVETGRVTYWSRSRQAFWVKGETSGHVQ 69

Query: 84  SVVELRTDCDQDALWLKVHVAGDGPTCHTGRRSCFY 119
            ++ELR DCD+D L L +    +GP CHT RRSCFY
Sbjct: 70  RLIELRIDCDRDCLLLLIE--QEGPACHTNRRSCFY 103


Lambda     K      H
   0.318    0.131    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 119
Length adjustment: 14
Effective length of query: 125
Effective length of database: 105
Effective search space:    13125
Effective search space used:    13125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 41 (20.4 bits)

Align candidate WP_011840918.1 RSPH17029_RS06510 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)

Software error:

../bin/blast/fastacmd -i /tmp/list.22939.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.22939.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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