Align Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 (characterized)
to candidate WP_011841528.1 RSPH17029_RS11250 acetate--CoA ligase
Query= SwissProt::Q8ZKF6
(652 letters)
>NCBI__GCF_000015985.1:WP_011841528.1
Length = 653
Score = 839 bits (2167), Expect = 0.0
Identities = 400/626 (63%), Positives = 488/626 (77%), Gaps = 5/626 (0%)
Query: 24 YETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLD 83
YE Y S+ DP+ FWGEQGK LDWI PY KVKNT+F PG VSIKW+EDGTLN+A NC+D
Sbjct: 27 YERMYAASVADPEAFWGEQGKRLDWIKPYTKVKNTNFRPGEVSIKWFEDGTLNIAWNCID 86
Query: 84 RHLQENGDRTAIIWEGDD-TSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMV 142
RHL +TAIIWE DD + ++HISY+ELH +VCR AN L+ G++KGD V +Y+PM+
Sbjct: 87 RHLATRAKQTAIIWEPDDPNAPAQHISYQELHDNVCRMANVLVSQGVRKGDRVVMYLPMI 146
Query: 143 PEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNV 202
PEAA AMLACARIGA+HSV+F GFSP+A+A RI D +++VITAD R GR PLK N
Sbjct: 147 PEAAYAMLACARIGAIHSVVFAGFSPDALANRINDCQAKVVITADTAPRGGRRTPLKSNT 206
Query: 203 DDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFIL 262
D AL + + +V+K TG I W +GRD+ ++L+ ASP+ E +NAEDPLFIL
Sbjct: 207 DAALLH--CSDRVRCLVVKHTGDQIHWMDGRDVDVKELMRHASPDCPIEEVNAEDPLFIL 264
Query: 263 YTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLA 322
YTSGSTGKPKGV+HT+GGYL YAA T + FDYH GD++WCTADVGWVTGHSY++YGPLA
Sbjct: 265 YTSGSTGKPKGVVHTSGGYLTYAAMTHQMTFDYHDGDVFWCTADVGWVTGHSYIVYGPLA 324
Query: 323 CGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRI 382
GATTLMFEGVP +P R V +KH+VN YTAPTAIR+LM G + ++ D SSL++
Sbjct: 325 NGATTLMFEGVPTYPDAGRFWAVCEKHKVNQFYTAPTAIRSLMGLGPEWVDKYDLSSLKL 384
Query: 383 LGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFF 442
LGSVGEPINPEAW WY +GK +CP+VDT+WQTETGG MITPLPGAI +K G+A++PFF
Sbjct: 385 LGSVGEPINPEAWSWYNTHVGKGRCPIVDTFWQTETGGHMITPLPGAIPVKPGAASKPFF 444
Query: 443 GVQPALVD-NEGHP-QEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGD 500
GV+P ++D +GH E ATEG L I DSWPGQ RTL+GDHERFE+ YFS +K YF+GD
Sbjct: 445 GVKPVILDPTDGHELHETATEGVLCIADSWPGQMRTLWGDHERFEEAYFSQYKGYYFTGD 504
Query: 501 GARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIY 560
G RRD DGYYW+TGRVDDV+NVSGHR+GTAE+ESALVAH ++AEAAVVG PH IKGQ IY
Sbjct: 505 GCRRDADGYYWVTGRVDDVINVSGHRMGTAEVESALVAHAQVAEAAVVGYPHDIKGQGIY 564
Query: 561 AYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAA 620
AYVTL +G +P+ EL ++ WVR EIGP+A+PDV+ W LPKTRSGKIMRRILRKIA
Sbjct: 565 AYVTLMNGVQPTEELRKDLVKWVRTEIGPIASPDVIQWAPGLPKTRSGKIMRRILRKIAE 624
Query: 621 GDTSNLGDTSTLADPGVVEKLLEEKQ 646
D +LGDT+TLADP VV+ L+ ++
Sbjct: 625 NDFGSLGDTTTLADPSVVDDLIANRK 650
Lambda K H
0.317 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1501
Number of extensions: 65
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 653
Length adjustment: 38
Effective length of query: 614
Effective length of database: 615
Effective search space: 377610
Effective search space used: 377610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Align candidate WP_011841528.1 RSPH17029_RS11250 (acetate--CoA ligase)
to HMM TIGR02188 (acs: acetate--CoA ligase (EC 6.2.1.1))
../bin/blast/fastacmd -i /tmp/list.13731.in -d ../tmp/NCBI__GCF_000015985.1/orgs.faa -p T > /tmp/gapView.13731.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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