Align acetohydroxy-acid synthase small subunit (EC 2.2.1.6) (characterized)
to candidate WP_011868713.1 MMARC5_RS04830 acetolactate synthase small subunit
Query= metacyc::MONOMER-11901
(169 letters)
>NCBI__GCF_000016125.1:WP_011868713.1
Length = 169
Score = 261 bits (668), Expect = 3e-75
Identities = 130/169 (76%), Positives = 155/169 (91%)
Query: 1 MKNTHIISVLVLNKPGVLQRISGLFTRRWYNISSITGGSTDSTDISRMTIVVKGDDKVVE 60
M++ HIISVLVL+KPGVLQRISGLFTRRW+NISS+T GST++ D++RMTIVV+GDD V+E
Sbjct: 1 MEHKHIISVLVLHKPGVLQRISGLFTRRWFNISSMTVGSTENPDVARMTIVVQGDDTVLE 60
Query: 61 QVVKQLNKLIEVIKVIDLDEEECVERELCLIKIYAPTESSKSQVIQYANIFRGNIVDLSQ 120
QVVKQLNKL+EVIKV DL+ + V+RELCL+K+YAPTE SKSQVIQYANIFRG IVDLS
Sbjct: 61 QVVKQLNKLVEVIKVTDLNSNKSVQRELCLVKVYAPTEDSKSQVIQYANIFRGKIVDLST 120
Query: 121 ESLTVQITGDKTKISAFIKLVKPMGIKEISRTGLTALMRGPKILKSNKA 169
E+LTV+ITGD+ K++AF+ LV+PMGIKEI+RTGLTALMRG KILKSNKA
Sbjct: 121 ETLTVEITGDEQKVNAFLDLVRPMGIKEIARTGLTALMRGSKILKSNKA 169
Lambda K H
0.317 0.134 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 154
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 169
Length adjustment: 18
Effective length of query: 151
Effective length of database: 151
Effective search space: 22801
Effective search space used: 22801
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 43 (21.2 bits)
Align candidate WP_011868713.1 MMARC5_RS04830 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.2872.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.2872.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.