Alignments for a candidate for trpD_1 in Clostridium kluyveri DSM 555

Align Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 (characterized)
to candidate WP_012101662.1 CKL_RS06275 aminodeoxychorismate/anthranilate synthase component II

Query= SwissProt::P28819
         (194 letters)



>NCBI__GCF_000016505.1:WP_012101662.1
          Length = 194

 Score =  203 bits (516), Expect = 2e-57
 Identities = 97/188 (51%), Positives = 140/188 (74%), Gaps = 2/188 (1%)

Query: 1   MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSP-DFLMISPGPCSPDEA 59
           MILMIDNYDSFTYNL QY+GEL E++VV RND I+ ++IE+      ++ISPGP  P+++
Sbjct: 1   MILMIDNYDSFTYNLYQYIGELHEDIVVVRNDEISAEDIEKFENLQGIVISPGPGVPEDS 60

Query: 60  GISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLMHGKTSDIEHDGKTIFEGLK 119
           GI +E IK +   IPI G+CLGHQ+IA  +GGDVVRA+ + HGKTS +EH    +F+G+K
Sbjct: 61  GICIEVIKKYGKDIPILGICLGHQAIAVAYGGDVVRAKEIRHGKTSMVEHVENELFKGIK 120

Query: 120 NPLVATRYHSLIVKPET-LPSCFTVTAQTKEGEIMAIRHNDLPIEGVQFHPESIMTSFGK 178
           +P+ A RYHSLIV  E+ +P+     A++ +G +M I+H+  P+ G+QFHPESI+T  G+
Sbjct: 121 SPIRAMRYHSLIVDEESIIPTHIFKIAESDDGVLMGIKHSVYPVYGLQFHPESILTECGR 180

Query: 179 EMLRNFIE 186
            +++NF++
Sbjct: 181 GIIKNFLQ 188


Lambda     K      H
   0.320    0.139    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 7
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 194
Length adjustment: 20
Effective length of query: 174
Effective length of database: 174
Effective search space:    30276
Effective search space used:    30276
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 44 (21.6 bits)

Align candidate WP_012101662.1 CKL_RS06275 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.18327.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18327.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.