Alignments for a candidate for trpE in Heliomicrobium modesticaldum Ice1; ATCC 51547

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_012282975.1 HM1_RS08615 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_000019165.1:WP_012282975.1
          Length = 516

 Score =  392 bits (1008), Expect = e-113
 Identities = 227/515 (44%), Positives = 318/515 (61%), Gaps = 37/515 (7%)

Query: 5   EFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSIIGLP 64
           +F+RL+ + Y  +P+      D DTP+++Y KLA     YLLESV+ G   GRYS  G  
Sbjct: 12  DFVRLSRE-YRYVPMWISFSTDEDTPITLYRKLAGEGLGYLLESVERGTVLGRYSYAGAE 70

Query: 65  CRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKARYQVPTVP---GLPRFDGGLVG 121
               L  +      + +   +   +  DPL  V ++ A  +V  VP   GL  F GG VG
Sbjct: 71  ---PLAFFSWPPEPAANATGS---NAGDPLKGVGQWLADLKVAPVPPNAGLAPFYGGPVG 124

Query: 122 YFGYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENAY 181
           YF YD VR+ E+      +   L  P+++LM++   ++ D+L  +   ++LA+  +E AY
Sbjct: 125 YFSYDLVRHYERLPEHSVDDRQL--PEMMLMITRYTLIIDHLRHRGTLVLLAEAGDEAAY 182

Query: 182 ERGQARLEELLERLRQPITPRRGLDLEAAQGRE------------------PAFRA---- 219
             GQ++L  L ERLR+P +P   L++ A    +                   AF A    
Sbjct: 183 RYGQSQLAGLFERLREPASPLP-LEVSAVMSAKIPADTAVKAGAADEKQVPSAFAAGDEM 241

Query: 220 --SFTREDYENAVGRIKDYILAGDCMQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYF 277
             +F R  +  AVGR K+YI AGD  Q+V SQR +   +  P+++YRALR  NP+PY+++
Sbjct: 242 TSTFDRAGFCAAVGRCKEYIAAGDAFQIVLSQRFTRPLRTHPLNVYRALRSLNPSPYLFY 301

Query: 278 FNFGDFHVVGSSPEVLVRVEDGLVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHL 337
            N     V GSSPE L+RVE   V   PIAGTRPRG + + D  L ++LL+D KE AEHL
Sbjct: 302 LNLPGMQVAGSSPEALIRVEGRRVETHPIAGTRPRGRDADEDRRLAEELLADEKERAEHL 361

Query: 338 MLIDLGRNDVGRVSDIGAVKVTEKMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPA 397
           ML+DLGRND+GRV  IG+V+V   M +E YS+VMHIVS V G+L+  ++A+DAL  ++PA
Sbjct: 362 MLVDLGRNDLGRVCQIGSVRVERFMEVEHYSHVMHIVSRVAGELKPAVTALDALSCVMPA 421

Query: 398 GTLSGAPKIRAMEIIDELEPVKRGVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAG 457
           GTLSGAPKIRAMEIIDELEPV+RG YGGAVGYL+++GN++T I IRT ++++G+  +Q G
Sbjct: 422 GTLSGAPKIRAMEIIDELEPVRRGPYGGAVGYLSFDGNLNTCITIRTVLMRDGKAQIQVG 481

Query: 458 GGIVADSVPALEWEETINKRRAMFRAVALAEQSVE 492
            GIVADSVP  E+ ET+NK RA+F A+  AE  ++
Sbjct: 482 AGIVADSVPETEYAETMNKARALFEALFSAEGGLQ 516


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 660
Number of extensions: 34
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 516
Length adjustment: 34
Effective length of query: 458
Effective length of database: 482
Effective search space:   220756
Effective search space used:   220756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_012282975.1 HM1_RS08615 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.1672.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.1672.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.