Alignments for a candidate for trpD_1 in Heliomicrobium modesticaldum Ice1; ATCC 51547

Align anthranilate synthase (subunit 2/2) (EC 4.1.3.27) (characterized)
to candidate WP_012282976.1 HM1_RS08620 aminodeoxychorismate/anthranilate synthase component II

Query= BRENDA::P20576
         (201 letters)



>NCBI__GCF_000019165.1:WP_012282976.1
          Length = 195

 Score =  256 bits (653), Expect = 2e-73
 Identities = 124/190 (65%), Positives = 149/190 (78%), Gaps = 5/190 (2%)

Query: 1   MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAG 60
           M+++IDNYDSFTYNLVQY GE+   V+V RND ++ E I  LAP  IV+SPGPCTPNEAG
Sbjct: 1   MIVVIDNYDSFTYNLVQYLGEMVDAVEVYRNDAIAPEAIAGLAPSHIVISPGPCTPNEAG 60

Query: 61  VSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLAN 120
           +S+ VI R+AG++P+LGVCLGHQSIGQ FGG V+RA ++MHGKTSPI+H    +FAGL N
Sbjct: 61  ISMDVIGRYAGQIPILGVCLGHQSIGQVFGGRVIRASRLMHGKTSPIYHDGRTIFAGLPN 120

Query: 121 PLTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTE 180
           P T TRYHSL+V+ ESLP+CLEVTA +        EIMG+RH+   VEGVQFHPESILTE
Sbjct: 121 PFTATRYHSLIVEEESLPDCLEVTARSDQG-----EIMGLRHREYAVEGVQFHPESILTE 175

Query: 181 QGHELLANFL 190
            G  LL NFL
Sbjct: 176 AGKGLLRNFL 185


Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 193
Number of extensions: 5
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 195
Length adjustment: 20
Effective length of query: 181
Effective length of database: 175
Effective search space:    31675
Effective search space used:    31675
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)

Align candidate WP_012282976.1 HM1_RS08620 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.2984.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.2984.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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