Alignments for a candidate for hisE in Heliomicrobium modesticaldum Ice1; ATCC 51547

Align phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (characterized)
to candidate WP_012284026.1 HM1_RS13850 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE

Query= reanno::HerbieS:HSERO_RS20310
         (166 letters)



>NCBI__GCF_000019165.1:WP_012284026.1
          Length = 225

 Score =  119 bits (298), Expect = 3e-32
 Identities = 62/139 (44%), Positives = 91/139 (65%), Gaps = 11/139 (7%)

Query: 1   MSISAKWLNKVKWDEVGLVPVIAQEVGSNDVLMFAWMNREALARTVEIGQAVYWSRSRKK 60
           ++++  +++++K+D  GL+P + Q+  S  VLM A+MNRE++A+T+E GQ  ++SRSRK+
Sbjct: 4   LNVAPSFIDELKFDAHGLIPAVIQDAASGRVLMVAYMNRESIAKTLETGQTHFYSRSRKE 63

Query: 61  LWHKGEESGHFQKVHEIRLDCDEDVVLLKVEQVAGIACHTGRHSCFFQKFE----GSADS 116
           LWHKG  SGHFQ+V  +  DCD D +L +VEQV G ACH G  SCF    E    G+ DS
Sbjct: 64  LWHKGATSGHFQQVTAVEYDCDRDCLLWQVEQV-GAACHEGSFSCFRGIGEVAGKGAVDS 122

Query: 117 GEWVT------VEPVLKDL 129
            E V       +  +L+DL
Sbjct: 123 AESVAGAGGSRIGAILEDL 141


Lambda     K      H
   0.316    0.132    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 6
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 225
Length adjustment: 20
Effective length of query: 146
Effective length of database: 205
Effective search space:    29930
Effective search space used:    29930
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 44 (21.6 bits)

Align candidate WP_012284026.1 HM1_RS13850 (bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE)
to HMM PF01502 (PRA-CH)

Software error:

../bin/blast/fastacmd -i /tmp/list.21424.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21424.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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