Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_012330229.1 M446_RS01155 acetolactate synthase 3 large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000019365.1:WP_012330229.1
Length = 592
Score = 617 bits (1592), Expect = 0.0
Identities = 312/569 (54%), Positives = 406/569 (71%), Gaps = 5/569 (0%)
Query: 15 AAPEMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAAD 74
AA M GAE+++ AL ++GV+ ++GYPGGAVL IYD L Q +HILVRHEQ AVHAA+
Sbjct: 3 AAEVMTGAEMVIRALQDQGVDTLFGYPGGAVLPIYDALFHQDSVKHILVRHEQGAVHAAE 62
Query: 75 GYARATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTV 134
GYAR++GKVG LVTSGPG TN VTG+ A LDSIP+V ITG VPTH IG DAFQECDTV
Sbjct: 63 GYARSSGKVGCVLVTSGPGATNVVTGLTDALLDSIPLVCITGQVPTHLIGSDAFQECDTV 122
Query: 135 GITRPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSID 194
GITR KHN+LVK + DL + +AF++A+ GRPGPVV+D+PKDV + Y P
Sbjct: 123 GITRSCTKHNYLVKSIDDLPRILHEAFYVASHGRPGPVVIDLPKDVQFASGLYRRPVENG 182
Query: 195 MRSYNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLA--NASDELRQLAALTGHPVTN 252
++Y P +G +IR AVAL+ GA RP YTGGGV+ + AS LR+L TG P+T+
Sbjct: 183 HKTYKPQIQGDRSKIRAAVALMAGARRPVFYTGGGVINSGPEASRLLRELVRTTGFPITS 242
Query: 253 TLMGLGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQAR 312
TLMGLGA+PG+ QF+GMLGMHGTYEAN+AM CDV+I IGARFDDR+ G F+ ++
Sbjct: 243 TLMGLGAYPGSDPQFLGMLGMHGTYEANLAMHECDVMICIGARFDDRITGRLDAFSPFSK 302
Query: 313 KIIHIDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWR 372
K IH+DID SSI+K VK D+ I+G+ VL +++A+ +A P + L +W +I W+
Sbjct: 303 K-IHVDIDASSINKNVKADLAILGDCASVLADMLAEWRAITPTPDKGRLTEWLSKINGWK 361
Query: 373 SVDCLKYDRSSEIIKPQYVVEKIWELTK-GDAFICSDVGQHQMWAAQFYKFDEPRRWINS 431
+ +CL Y S+ IKPQ+ V++++E TK + ++ ++VGQHQMWAAQ+YKF+EP RW+ S
Sbjct: 362 ARECLGYWPSATTIKPQHAVQRLYEATKHRETYVTTEVGQHQMWAAQYYKFEEPNRWMTS 421
Query: 432 GGLGTMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGY 491
GGLGTMG GLP A+G + A P V+ I GE SI M +QE+ST +QY PVKI LNN Y
Sbjct: 422 GGLGTMGYGLPAAIGAQLAHPGALVIDIAGEASILMNMQEMSTAVQYRLPVKIFILNNEY 481
Query: 492 LGMVRQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDR 551
+GMVRQWQE+ + +RYS SY +LPDFVKLAEAYG G+R E+ D++ A++E D
Sbjct: 482 MGMVRQWQELLHGSRYSESYSSSLPDFVKLAEAYGAKGIRCERPGDLDAAIQEMLDY-DG 540
Query: 552 TVFLDFQTDPTENVWPMVQAGKGISEMLL 580
V D D TEN +PM+ +GK +EMLL
Sbjct: 541 PVIFDCIVDKTENCFPMIPSGKAHNEMLL 569
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 972
Number of extensions: 36
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 592
Length adjustment: 37
Effective length of query: 548
Effective length of database: 555
Effective search space: 304140
Effective search space used: 304140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_012330229.1 M446_RS01155 (acetolactate synthase 3 large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.10033.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.10033.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.