Alignments for a candidate for ilvI in Nostoc punctiforme ATCC 29133; PCC 73102

Align acetolactate synthase (subunit 2/2) (EC 2.2.1.6) (characterized)
to candidate WP_012408418.1 NPUN_RS08810 biosynthetic-type acetolactate synthase large subunit

Query= BRENDA::P9WG41
         (618 letters)



>NCBI__GCF_000020025.1:WP_012408418.1
          Length = 637

 Score =  544 bits (1401), Expect = e-159
 Identities = 297/583 (50%), Positives = 382/583 (65%), Gaps = 13/583 (2%)

Query: 24  KHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIPGGAVLPVYDPLFDSKK---LRHV 80
           K   A    V  ++ +G  A++ SL   GVD IFG PGGA+LP+YD L+  +    ++H+
Sbjct: 24  KQSRASSPPVLPKRASGGFALLDSLHRHGVDYIFGYPGGAILPIYDDLYKVEATGAIKHI 83

Query: 81  LVRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRG 140
           LVRHEQGA HAA GYA  TG+VGVC  TSGPGATNLVT +A A MDSIP++ +TGQV R 
Sbjct: 84  LVRHEQGAAHAADGYARATGKVGVCFGTSGPGATNLVTGIATAYMDSIPMIVVTGQVARP 143

Query: 141 LIGTDAFQEADISGITMPITKHNFLVRSGDDIPRVLAEAFHIAASGRPGAVLVDIPKDVL 200
            IGTDAFQE DI GIT+PI KH+++VR   D+ R++AEAFHIA++GRPG VL+D+PKDV 
Sbjct: 144 SIGTDAFQETDIYGITLPIVKHSYVVRDPKDMARIVAEAFHIASTGRPGPVLIDVPKDVA 203

Query: 201 QGQCTF--SWPPRMELPGYKPNTKPHSRQVREAAKLIAAARKPVLYVGGGVIRGEATEQL 258
             +  +    P  ++L GY+P  K + RQ+  A +LI  +R+P+LY+GGG I   A E++
Sbjct: 204 LEEFDYVPVKPGSVKLRGYRPTVKGNPRQINAAIQLITESRRPLLYIGGGAIAAGAHEEI 263

Query: 259 RELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVAALQRSDLLIALGTRFDDR 318
           +ELAEL  IPV TTLM  GAF + H   LGM GMHGT  A  A+   DLLI +G RFDDR
Sbjct: 264 KELAELFNIPVTTTLMGIGAFDEHHPLALGMLGMHGTAYANFAVSDCDLLICVGARFDDR 323

Query: 319 VTGKLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVITELIAMLRHHHIPGT-IE 377
           VTGKLD FA  AKVIH DIDPAE+GKNR  +VPIVGDV+ V+ +L+   +   +  T  +
Sbjct: 324 VTGKLDEFASRAKVIHIDIDPAEVGKNRIPEVPIVGDVRNVLVDLLRRCKETGVKATPNQ 383

Query: 378 MADWWAYLNGVRKTYPLSYGPQSDGSLSPEYVIEKLGEIAGPDAVFVAGVGQHQMWAAQF 437
             +W   +N  R  YPL   PQ   S+SP+ VI ++   A P+A +   VGQHQMWAAQF
Sbjct: 384 NQEWLNLVNRWRDEYPLIV-PQHPDSISPQEVIVEVNSQA-PNAFYTTDVGQHQMWAAQF 441

Query: 438 IRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGDGCFQMTNQELATCAVEG 497
           ++   PR W++S GLGTMGF +PAAMGAK+A P  EV  I GD  FQM  QEL T A  G
Sbjct: 442 LK-NGPRRWISSAGLGTMGFGLPAAMGAKVAFPDEEVICISGDASFQMCLQELGTLAQYG 500

Query: 498 IPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDFVKLAEALGCVGLRCERE 557
           I VK  +INNG  GMVRQWQ  FY ERYS +++      +PD   LA+A G  G+     
Sbjct: 501 INVKTIIINNGWQGMVRQWQQAFYGERYSCSNMEV---GMPDVELLAKAYGIKGMVISDR 557

Query: 558 EDVVDVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEI 600
             + D I +  A +  PV+++  V  D   +PMVA G SN ++
Sbjct: 558 SQLKDAIAEMLA-HKGPVILNVHVTRDENCYPMVAPGKSNAQM 599


Lambda     K      H
   0.319    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1141
Number of extensions: 60
Number of successful extensions: 6
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 637
Length adjustment: 38
Effective length of query: 580
Effective length of database: 599
Effective search space:   347420
Effective search space used:   347420
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)

Align candidate WP_012408418.1 NPUN_RS08810 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.30700.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30700.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.