GapMind for catabolism of small carbon sources

 

Protein WP_012473781.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012473781.1

Length: 447 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 9 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism pccA med Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit; PCC; EC 6.4.1.3; EC 6.3.4.14 (characterized) 50% 74% 446.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
propionate catabolism pccA med Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit; PCC; EC 6.4.1.3; EC 6.3.4.14 (characterized) 50% 74% 446.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-threonine catabolism pccA med Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit; PCC; EC 6.4.1.3; EC 6.3.4.14 (characterized) 50% 74% 446.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-valine catabolism pccA med Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit; PCC; EC 6.4.1.3; EC 6.3.4.14 (characterized) 50% 74% 446.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-isoleucine catabolism pccA1 med acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 47% 87% 399.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
propionate catabolism pccA1 med acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 47% 87% 399.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-threonine catabolism pccA1 med acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 47% 87% 399.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-valine catabolism pccA1 med acyl CoA carboxylase biotin carboxylase subunit (EC 2.1.3.15; EC 6.4.1.3; EC 6.3.4.14) (characterized) 47% 87% 399.4 biotin carboxylase (EC 6.3.4.14) 62% 567.4
L-leucine catabolism liuB lo Methylcrotonoyl-CoA carboxylase (EC 6.4.1.4) (characterized) 52% 67% 438.7 biotin carboxylase (EC 6.3.4.14) 62% 567.4

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

New query