GapMind for catabolism of small carbon sources

 

Protein WP_012473876.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012473876.1

Length: 471 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 5 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-cellobiose catabolism pgmA med phosphomannose mutase (EC 5.4.2.8) (characterized) 35% 96% 259.6 phosphoacetylglucosamine mutase (EC 5.4.2.3) 31% 166.0
D-galactose catabolism pgmA med phosphomannose mutase (EC 5.4.2.8) (characterized) 35% 96% 259.6 phosphoacetylglucosamine mutase (EC 5.4.2.3) 31% 166.0
lactose catabolism pgmA med phosphomannose mutase (EC 5.4.2.8) (characterized) 35% 96% 259.6 phosphoacetylglucosamine mutase (EC 5.4.2.3) 31% 166.0
sucrose catabolism pgmA med phosphomannose mutase (EC 5.4.2.8) (characterized) 35% 96% 259.6 phosphoacetylglucosamine mutase (EC 5.4.2.3) 31% 166.0
trehalose catabolism pgmA med phosphomannose mutase (EC 5.4.2.8) (characterized) 35% 96% 259.6 phosphoacetylglucosamine mutase (EC 5.4.2.3) 31% 166.0

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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