GapMind for catabolism of small carbon sources

 

Protein WP_012474118.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474118.1

Length: 421 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 4 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism pco med decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) (characterized) 34% 86% 114 enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.9) 32% 72.4
propionate catabolism pco med decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) (characterized) 34% 86% 114 enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.9) 32% 72.4
L-threonine catabolism pco med decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) (characterized) 34% 86% 114 enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.9) 32% 72.4
L-valine catabolism pco med decanoate oxidase (EC 1.3.3.6; EC 5.3.3.14) (characterized) 34% 86% 114 enoyl-[acyl-carrier-protein] reductase (EC 1.3.1.9) 32% 72.4

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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