GapMind for catabolism of small carbon sources

 

Protein WP_012474341.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474341.1

Length: 250 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 8 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-fructose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
D-fructose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
L-fucose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
L-fucose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
D-galactose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
D-galactose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
glycerol catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
glycerol catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
lactose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
lactose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
myo-inositol catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
myo-inositol catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
L-rhamnose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
L-rhamnose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9
sucrose catabolism tpi hi Triosephosphate isomerase; TIM; TPI; Triose-phosphate isomerase; EC 5.3.1.1 (characterized) 48% 100% 238.8
sucrose catabolism tpi hi tpiA: triose-phosphate isomerase (EC 5.3.1.1) (TIGR00419) 100% 204.9

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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