GapMind for catabolism of small carbon sources

 

Protein WP_012474594.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474594.1

Length: 1106 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 12 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism mcmA hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 876.7
propionate catabolism mcmA hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 876.7
L-threonine catabolism mcmA hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 876.7
L-valine catabolism mcmA hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 876.7
L-isoleucine catabolism mcm-large hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 872.8
propionate catabolism mcm-large hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 872.8
L-threonine catabolism mcm-large hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 872.8
L-valine catabolism mcm-large hi methylmalonyl-CoA mutase (EC 5.4.99.2) (characterized) 64% 94% 872.8
L-isoleucine catabolism mcm-small hi methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 47% 84% 118.2
propionate catabolism mcm-small hi methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 47% 84% 118.2
L-threonine catabolism mcm-small hi methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 47% 84% 118.2
L-valine catabolism mcm-small hi methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 47% 84% 118.2

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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