GapMind for catabolism of small carbon sources

 

Protein WP_012474608.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012474608.1

Length: 548 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 5 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-cellobiose catabolism pgmA hi phosphoglucomutase; EC 5.4.2.2 (characterized) 57% 100% 617.1
D-cellobiose catabolism pgmA hi pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) (TIGR01132) 100% 856.2
D-galactose catabolism pgmA hi phosphoglucomutase; EC 5.4.2.2 (characterized) 57% 100% 617.1
D-galactose catabolism pgmA hi pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) (TIGR01132) 100% 856.2
lactose catabolism pgmA hi phosphoglucomutase; EC 5.4.2.2 (characterized) 57% 100% 617.1
lactose catabolism pgmA hi pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) (TIGR01132) 100% 856.2
sucrose catabolism pgmA hi phosphoglucomutase; EC 5.4.2.2 (characterized) 57% 100% 617.1
sucrose catabolism pgmA hi pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) (TIGR01132) 100% 856.2
trehalose catabolism pgmA hi phosphoglucomutase; EC 5.4.2.2 (characterized) 57% 100% 617.1
trehalose catabolism pgmA hi pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific (EC 5.4.2.2) (TIGR01132) 100% 856.2

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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