GapMind for Amino acid biosynthesis

 

Protein WP_012475142.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475142.1

Length: 383 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 3 steps in Amino acid biosynthesis

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-lysine biosynthesis hcs hi homocitrate synthase (EC 2.3.3.14) (characterized) 41% 97% 259.6 2-isopropylmalate synthase (EC 2.3.3.13) 37% 242.7
L-leucine biosynthesis leuA med 2-isopropylmalate synthase 2; EC 2.3.3.13; Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2 (uncharacterized) 42% 96% 283.5 homocitrate synthase (EC 2.3.3.14) 41% 259.6
L-isoleucine biosynthesis cimA lo Putative (R)-citramalate synthase CimA; EC 2.3.3.21 (uncharacterized) 36% 75% 231.1 homocitrate synthase (EC 2.3.3.14) 41% 259.6

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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