GapMind for catabolism of small carbon sources

 

Protein WP_012475165.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475165.1

Length: 91 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-lactate catabolism Shew_2732 hi small component of L-lactate and L-malate uptake system (characterized) 54% 92% 101.7 small component of D-alanine uptake system, with Psest_0347 (actP-like) 49% 82.4
pyruvate catabolism yjcH med Membrane protein containing probable solute: sodium symporter, small subunit domain (characterized, see rationale) 51% 90% 88.6 small component of lactate uptake system 61% 109.4

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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