GapMind for catabolism of small carbon sources

 

Protein WP_012475469.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475469.1

Length: 1227 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 4 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
L-isoleucine catabolism mcm-small lo methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 32% 57% 46.2 methionine synthase (EC 2.1.1.13) 60% 1466.8
propionate catabolism mcm-small lo methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 32% 57% 46.2 methionine synthase (EC 2.1.1.13) 60% 1466.8
L-threonine catabolism mcm-small lo methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 32% 57% 46.2 methionine synthase (EC 2.1.1.13) 60% 1466.8
L-valine catabolism mcm-small lo methylmalonyl-CoA mutase (subunit 1/2) (EC 5.4.99.2) (characterized) 32% 57% 46.2 methionine synthase (EC 2.1.1.13) 60% 1466.8

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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