GapMind for catabolism of small carbon sources

 

Protein WP_012475519.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475519.1

Length: 304 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-galactose catabolism galE med UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) (characterized) 35% 99% 197.2 dTDP-4-dehydro-6-deoxyglucose reductase; dTDP-4-dehydro-6-deoxy-D-glucose reductase; dTDP-4-keto-6-deoxyglucose reductase; dTDP-6-deoxy-D-xylo-hex-4-ulopyranose reductase; EC 1.1.1.266 36% 139.8
lactose catabolism galE med UDP-glucose 4-epimerase (EC 5.1.3.2); UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) (characterized) 35% 99% 197.2 dTDP-4-dehydro-6-deoxyglucose reductase; dTDP-4-dehydro-6-deoxy-D-glucose reductase; dTDP-4-keto-6-deoxyglucose reductase; dTDP-6-deoxy-D-xylo-hex-4-ulopyranose reductase; EC 1.1.1.266 36% 139.8

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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