GapMind for catabolism of small carbon sources

 

Protein WP_012475859.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475859.1

Length: 329 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 2 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-galactose catabolism galE hi UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 (characterized) 43% 95% 269.2 UDP-arabinose 4-epimerase (EC 5.1.3.5) 42% 248.8
D-galactose catabolism galE med galE: UDP-glucose 4-epimerase GalE (EC 5.1.3.2) (TIGR01179) 97% 340 UDP-arabinose 4-epimerase (EC 5.1.3.5) 42% 248.8
lactose catabolism galE hi UDP-glucose 4-epimerase; Galactowaldenase; UDP-galactose 4-epimerase; EC 5.1.3.2 (characterized) 43% 95% 269.2 UDP-arabinose 4-epimerase (EC 5.1.3.5) 42% 248.8
lactose catabolism galE med galE: UDP-glucose 4-epimerase GalE (EC 5.1.3.2) (TIGR01179) 97% 340 UDP-arabinose 4-epimerase (EC 5.1.3.5) 42% 248.8

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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