GapMind for catabolism of small carbon sources

 

Protein WP_012475885.1 in Chlorobium phaeobacteroides BS1

Annotation: NCBI__GCF_000020545.1:WP_012475885.1

Length: 397 amino acids

Source: GCF_000020545.1 in NCBI

Candidate for 8 steps in catabolism of small carbon sources

Pathway Step Score Similar to Id. Cov. Bits Other hit Other id. Other bits
D-fructose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
L-fucose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
D-galactose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
glycerol catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
lactose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
myo-inositol catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
L-rhamnose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5
sucrose catabolism tpi lo triose-phosphate isomerase (EC 5.3.1.1) (characterized) 57% 61% 443.4 phosphoglycerate kinase (EC 2.7.2.3) 57% 461.5

Sequence Analysis Tools

Do not recognize NCBI assembly GCF_000020545.1

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