Alignments for a candidate for trpE in Chlorobaculum parvum NCIB 8327

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_012502776.1 CPAR_RS07835 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_000020505.1:WP_012502776.1
          Length = 504

 Score =  383 bits (983), Expect = e-111
 Identities = 228/493 (46%), Positives = 312/493 (63%), Gaps = 31/493 (6%)

Query: 18  PLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSIIGLPCRTVLRV-YDHQV 76
           PL     AD +TP+S+YLKL   P S LLESV+G E+  R+S + +    VL+   D + 
Sbjct: 22  PLVRTFQADTETPVSVYLKL-QRPYSCLLESVEGEERLARFSYVAIDPVAVLKGRVDGEA 80

Query: 77  RISIDGVETERFDCADPLAFVEE------------FKARYQVPTVPGLPRFD-GGLVGYF 123
             ++D ++T RFD    +   E             F +  Q  +  G  +    G+ GYF
Sbjct: 81  --TLDVLDT-RFDALSSIVQEESDLRTIVDRCMAMFSSEEQPRSKSGSQQMSTSGVFGYF 137

Query: 124 GYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENAYER 183
           GYD +  +E R+ +   PDP G PD+ L+  D +V+FDN+  K++ +  A+  +E    R
Sbjct: 138 GYDTMHLIE-RIPSPELPDPAGMPDLCLLFCDTLVIFDNVMRKLYLV--ANYLDEADRAR 194

Query: 184 GQARLEELLERLRQPITPRRGLDLEAAQGREPA-FRASFTREDYENAVGRIKDYILAGDC 242
            + +++EL   +++P+ P    DL   +   P    ++ TRE+Y   V + K+YIL+GD 
Sbjct: 195 AERKIDELAALMQKPLDP----DLVTLKPELPEPVVSNTTREEYYEKVLKAKEYILSGDI 250

Query: 243 MQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDG--- 299
            QV  SQR+  +    P D+YR LR  NP+PY+YFF+F DFHVVGSSPE+LV+VE     
Sbjct: 251 FQVQISQRLKRKLHTRPFDVYRVLRTINPSPYLYFFDFDDFHVVGSSPELLVKVERDHAG 310

Query: 300 --LVTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAVK 357
             +V  RPIAGTR RG + E D  + ++LLSD KE AEHLMLIDL RND+GR++ IG V+
Sbjct: 311 RRIVDTRPIAGTRRRGESFEDDERIAKELLSDEKERAEHLMLIDLSRNDIGRIAKIGTVE 370

Query: 358 VTEKMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAPKIRAMEIIDELEP 417
             E MVIE+YS+VMHIVSNV G+L++GLSAMDA  +  PAGTL+GAPK+R+MEII ELE 
Sbjct: 371 TNEMMVIEKYSHVMHIVSNVRGELQDGLSAMDAFWSCFPAGTLTGAPKVRSMEIIYELEK 430

Query: 418 VKRGVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKR 477
            KRG+YGGAVGYL + G ++TAIAIRT VI +G ++ QA GGIVADS P  E+EET+NK 
Sbjct: 431 EKRGLYGGAVGYLDFRGQLNTAIAIRTMVISDGIIYFQAAGGIVADSTPEFEYEETMNKM 490

Query: 478 RAMFRAVALAEQS 490
           RA    +   E S
Sbjct: 491 RAGLTTLESIETS 503


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 609
Number of extensions: 24
Number of successful extensions: 6
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 504
Length adjustment: 34
Effective length of query: 458
Effective length of database: 470
Effective search space:   215260
Effective search space used:   215260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_012502776.1 CPAR_RS07835 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.27854.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.27854.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.