Alignments for a candidate for ilvI in Thauera aminoaromatica S2

Align Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 (characterized)
to candidate WP_012585806.1 C665_RS00880 acetolactate synthase large subunit

Query= SwissProt::P0DP90
         (548 letters)



>NCBI__GCF_000310185.1:WP_012585806.1
          Length = 555

 Score =  488 bits (1255), Expect = e-142
 Identities = 257/551 (46%), Positives = 351/551 (63%), Gaps = 8/551 (1%)

Query: 1   MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGG-VEHLLCRHEQGAAMAAIGYAR 59
           M GAQ +V  L  QGV TV G PGGAI+P YDAL     + H+L RHEQGA   A G AR
Sbjct: 4   MTGAQLMVRLLERQGVRTVAGIPGGAILPFYDALSGSEHIHHVLARHEQGAGFIAQGMAR 63

Query: 60  ATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSL 119
            +G   VCIA+SGPGATNL+T +ADA LDSIP+V ITGQV    IGTDAFQEVD+ G+++
Sbjct: 64  VSGVPQVCIASSGPGATNLVTAIADACLDSIPMVVITGQVPQAMIGTDAFQEVDIYGITV 123

Query: 120 ACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQ--LASGDLEPWFTTVEN 177
             TKH+FLV+S +EL  ++ +AF +A SGRPGPVL+D+PKD+Q  L +    P     + 
Sbjct: 124 PITKHNFLVRSAQELLEVIPDAFRIAMSGRPGPVLIDVPKDVQNQLVAVAEFPAPAVADP 183

Query: 178 EVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAV 237
                 A VE A +M+ +A++P+LY+GGGV  + A P   +      +P T TL  LGA+
Sbjct: 184 APQLDLAAVELAAKMINEAEQPVLYLGGGVVASGAAPLAVQLAEQAGLPTTMTLMALGAM 243

Query: 238 EADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDP 297
             D+P  +GMLGMHG +  NF ++E D+L+ VGARFDDR  G+   F P+A ++H+DID 
Sbjct: 244 PMDHPLSIGMLGMHGARYTNFVLEEADVLVCVGARFDDRAIGRAAQFCPNAKIVHIDIDR 303

Query: 298 AEMNKLRQAHVALQGD----LNALLPALQQPLNQYDWQQHCAQLRDEHSWRYDHPGDAIY 353
           +E++K++ AHVA+  +    L ALLP +Q  L +  W  H   L+     ++    D   
Sbjct: 304 SELHKIKNAHVAIHANVKCALEALLPRVQATLRKR-WLSHVDSLKTRFPMQFPGQDDPRT 362

Query: 354 APLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSSGLGTMGFGLPAAVGA 413
              L++ ++       +V TDVGQHQMW AQ     RP  ++TS GLGTMGFGLP+A+GA
Sbjct: 363 HYGLIQAVAAALDDRAIVATDVGQHQMWVAQAYPFRRPRQWLTSGGLGTMGFGLPSALGA 422

Query: 414 QVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERY 473
            +A P  TVVC +GDGSF MN+QEL T+  + L +KIVL++N  LG+V Q Q LF+ +R 
Sbjct: 423 ALAEPGRTVVCFTGDGSFKMNIQELATLAEEGLNVKIVLMNNNALGLVYQQQTLFYGQRL 482

Query: 474 SETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENVWPL 533
             +     PDF+ +A  FG+    +   D   AAL   L+  GP L+H +ID  + V+P+
Sbjct: 483 FASKYRTEPDFVKIAEGFGVPAVDLDLADNPRAALAEALHRPGPCLIHATIDREQFVYPM 542

Query: 534 VPPGASNSEML 544
           VPPGA+N+EM+
Sbjct: 543 VPPGAANTEMI 553


Lambda     K      H
   0.320    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 816
Number of extensions: 22
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 555
Length adjustment: 36
Effective length of query: 512
Effective length of database: 519
Effective search space:   265728
Effective search space used:   265728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)

Align candidate WP_012585806.1 C665_RS00880 (acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.27090.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.27090.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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