Alignments for a candidate for hisI in Sulfurihydrogenibium azorense Az-Fu1

Align putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) (characterized)
to candidate WP_012674844.1 SULAZ_RS01585 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE

Query= metacyc::HISTCYCLOPRATPPHOS
         (203 letters)



>NCBI__GCF_000021545.1:WP_012674844.1
          Length = 208

 Score =  165 bits (417), Expect = 6e-46
 Identities = 82/196 (41%), Positives = 122/196 (62%), Gaps = 8/196 (4%)

Query: 16  DGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSGNFLNVV 75
           +GL+PVI Q+  SG++LM  Y N EA+ +T++SG  T++SR+++ LW KGETSGN   V+
Sbjct: 13  NGLVPVIAQNYYSGKILMQAYANKEAIQETIKSGYATYYSRSRKSLWKKGETSGNLQRVI 72

Query: 76  SIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAH--------QWLFLYQLEQLLAERKS 127
            I  DCD D+++ L    GP CH G  SCF    +         +  L++L + + ERK 
Sbjct: 73  DIKVDCDEDSVIYLVVEEGPACHTGEESCFYRNLNLEKDTKPLPFEILHKLYEKVEERKR 132

Query: 128 ADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQ 187
             PE SY  KL+  G+ +I QKVGEE +ET +A    ++ E+  E SDL++HL+V L D 
Sbjct: 133 LKPENSYVVKLFEKGSDKIIQKVGEEAIETVIALKNKNKEEIVYEVSDLLFHLIVALVDS 192

Query: 188 GLDLTTVIENLRKRHQ 203
           G++L  + E L KR++
Sbjct: 193 GVELKDIQEELLKRYK 208


Lambda     K      H
   0.317    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 208
Length adjustment: 21
Effective length of query: 182
Effective length of database: 187
Effective search space:    34034
Effective search space used:    34034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)

Align candidate WP_012674844.1 SULAZ_RS01585 (bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))

Software error:

../bin/blast/fastacmd -i /tmp/list.30597.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30597.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.