Alignments for a candidate for hisC in Thermomonospora curvata DSM 43183

Align Histidinol-phosphate aminotransferase 1; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 1 (uncharacterized)
to candidate WP_012850579.1 TCUR_RS00945 histidinol-phosphate transaminase

Query= curated2:Q46Y48
         (376 letters)



>NCBI__GCF_000024385.1:WP_012850579.1
          Length = 360

 Score =  239 bits (611), Expect = 7e-68
 Identities = 142/324 (43%), Positives = 188/324 (58%), Gaps = 7/324 (2%)

Query: 46  KLASNENPLGMPESAKHAAAAAIAELGRYPDSNGFELKAALSTKLGVPQDWLTLGNGSND 105
           KL+SNE+P G   S   A   A   + RYPD+N   L  A+S +  VP D + +G GS  
Sbjct: 34  KLSSNESPFGPLPSVLEAIGEAARRVNRYPDNNATALIEAISERFAVPADHIAVGCGSVG 93

Query: 106 ILELAAHALVTPGQSIVYAEYSFAVYALATQEIGARAIVVKARDYGHDLDAMAAAITSDT 165
           + ++   A+  PG  ++YA  SF  Y +     GA+A+ V  R+  HDL AMA AIT  T
Sbjct: 94  VTQMLLEAVAEPGAEVLYAWRSFEAYPVLVALSGAQAVQVPLREETHDLAAMAEAITERT 153

Query: 166 RLVFIANPNNPTGTFVPAAALETFLAKVPAEVVVVLDEAYNEYLDDDQQYDSVAWVRRYP 225
           RL+F+ NPNNPTGT V  A LE+FL +VPA+ +VVLDEAY EY+ D+Q  D +      P
Sbjct: 154 RLIFVCNPNNPTGTAVRRAELESFLDRVPADCLVVLDEAYREYIRDEQVPDGLTLYGDRP 213

Query: 226 NLLVSRTFSKAYGLAGLRIGYAVAQPELTDLLNRIRQPFNVNSVAQAAAVAALGDTAFLQ 285
           NL V RTFSKAYGLAGLR+G+ VA P +   + +   PF+VNS+AQAAA+A+L     L 
Sbjct: 214 NLAVLRTFSKAYGLAGLRVGFLVAHPVVAGAVRKTMLPFSVNSLAQAAAIASLAAEDELL 273

Query: 286 RSAELNRAGKAQLVEAFSRLGLEFVASSGNFVLVRVGDDDDAGARVNVALLRQGVIVRPV 345
              E     + ++V A    G     +  NFV +R+G+     A    A   QGV VRP 
Sbjct: 274 ERVEGTVKERHRVVSALRDQGWSVPPTEANFVWLRLGERTLDFA---AACEAQGVSVRPF 330

Query: 346 GNYGMPRWLRVTIGLPDENAAFIA 369
              G     RV+IGLP+EN AF+A
Sbjct: 331 AGEG----ARVSIGLPEENDAFLA 350


Lambda     K      H
   0.318    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 340
Number of extensions: 9
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 360
Length adjustment: 30
Effective length of query: 346
Effective length of database: 330
Effective search space:   114180
Effective search space used:   114180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate WP_012850579.1 TCUR_RS00945 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.10363.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.10363.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.