Align N-acetyl-gamma-glutamyl-phosphate reductase; Short=AGPR; EC 1.2.1.38 (characterized, see rationale)
to candidate WP_012969354.1 ALVIN_RS00525 N-acetyl-gamma-glutamyl-phosphate reductase
Query= uniprot:E4PLW0
(388 letters)
>NCBI__GCF_000025485.1:WP_012969354.1
Length = 340
Score = 453 bits (1165), Expect = e-132
Identities = 231/345 (66%), Positives = 272/345 (78%), Gaps = 5/345 (1%)
Query: 44 VIKVGIVGGTGYTGVELLRILAVHPEVSVSCITSRSEAGMPVAEMYPNLRGHYDLAFSEP 103
+I+VGIVGGTGYTG ELLR+LA HP+ + + ITSRSE+G+PVAEM+P+LRG DL FSEP
Sbjct: 1 MIRVGIVGGTGYTGAELLRLLARHPQAAPAVITSRSESGLPVAEMFPHLRGRLDLCFSEP 60
Query: 104 DVNVLGACDLVFFATPHGVAMRMVPELMSAGVRVVDLSADFRLKDLDVWANWYGMAHESP 163
D L CDLVFFATP+G AM+ VPEL+ G RV+DL+ADFRLKD +W WYGM H+ P
Sbjct: 61 DTGALAECDLVFFATPNGTAMQSVPELLERGTRVIDLAADFRLKDPALWERWYGMPHQCP 120
Query: 164 EWAEKAVYGLPEVVRDEIRNAQLVANPGCYPTAVQLGFLPLLEQGLVDPKRLIADAKSGA 223
+ + VYGLPEV RD IR A+L+ANPGCYPTAV LGFLPLLE+ VDP LIADAKSG
Sbjct: 121 DLLAETVYGLPEVNRDAIRRARLIANPGCYPTAVTLGFLPLLERRAVDPSWLIADAKSGV 180
Query: 224 SGAGRQGKIGMLHGEIGESFKAYGASGHRHLPEIRQGLCGAAGGDVGVTFVPHLIPMIRG 283
SGAGR+ + +L E+GESFKAY SGHRHLPEI Q L AG +VG+TFVPHL+PMIRG
Sbjct: 181 SGAGRKAETSLLMAEVGESFKAYSVSGHRHLPEITQNLQTFAGIEVGLTFVPHLVPMIRG 240
Query: 284 IEATLYAELKNPADFDRLQALFEQRFDDEPFVDVMPFGSHPETRSVRGANQCRMALHRQE 343
IEATLYA L + D L AL++ R+ DEPFVD M GS P+TRSVRG+N CR+A+ R
Sbjct: 241 IEATLYARLTD--DGLDLAALYQSRYADEPFVDFMVSGS-PDTRSVRGSNDCRIAVAR-- 295
Query: 344 QSNIVIVSSVIDNLVKGAAGQAVQNMNIMFGLKETMGLEAPALLP 388
Q +IVIV SVIDNLVKGAAGQAVQNMN+MFG ET+GLEA A+LP
Sbjct: 296 QGDIVIVQSVIDNLVKGAAGQAVQNMNLMFGFDETLGLEALAMLP 340
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 416
Number of extensions: 14
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 340
Length adjustment: 29
Effective length of query: 359
Effective length of database: 311
Effective search space: 111649
Effective search space used: 111649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_012969354.1 ALVIN_RS00525 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.4698.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.4698.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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