Alignments for a candidate for cysE in Kyrpidia tusciae DSM 2912

Align Serine acetyltransferase; SAT; EC 2.3.1.30 (characterized)
to candidate WP_013074202.1 BTUS_RS00690 serine O-acetyltransferase

Query= SwissProt::Q06750
         (217 letters)



>NCBI__GCF_000092905.1:WP_013074202.1
          Length = 229

 Score =  288 bits (736), Expect = 7e-83
 Identities = 139/212 (65%), Positives = 176/212 (83%), Gaps = 1/212 (0%)

Query: 3   FRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLARLISQVSR 62
           FR L+EDI  + D+DPAARS  EV+LTYSGLHA+W +R+AH LY R+ + LAR++SQ +R
Sbjct: 2   FRRLREDIQCIMDRDPAARSAVEVLLTYSGLHALWFYRVAHRLYLRRRFTLARMVSQFAR 61

Query: 63  FFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIK 122
           F TGIEIHPGA IGR  FIDHG GVVIGET EIG+NVT++QGVTLGGTGKEKGKRHPT+ 
Sbjct: 62  FLTGIEIHPGAKIGRGVFIDHGSGVVIGETAEIGDNVTIYQGVTLGGTGKEKGKRHPTVG 121

Query: 123 DDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNH 182
           ++ LI+TGAK+LG+IT+G+ SKIGAGSVVL DVP  STVVGIPGRVV+ +G++V  D++H
Sbjct: 122 NNVLISTGAKILGAITIGDNSKIGAGSVVLKDVPPNSTVVGIPGRVVILDGRRV-NDMDH 180

Query: 183 QDLPDPVADRFKSLEQQILELKAELEDRKERI 214
            +LPDPVAD  +S++QQI EL+ E+ + K  +
Sbjct: 181 VNLPDPVADLLRSMQQQINELRREIMELKGEV 212


Lambda     K      H
   0.323    0.141    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 252
Number of extensions: 11
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 229
Length adjustment: 22
Effective length of query: 195
Effective length of database: 207
Effective search space:    40365
Effective search space used:    40365
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)

Align candidate WP_013074202.1 BTUS_RS00690 (serine O-acetyltransferase)
to HMM TIGR01172 (cysE: serine O-acetyltransferase (EC 2.3.1.30))

Software error:

../bin/blast/fastacmd -i /tmp/list.10578.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.10578.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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