Align Chorismate mutase; CM; Monofunctional chorismate mutase AroQ(f); EC 5.4.99.5 (characterized)
to candidate WP_013645480.1 METBO_RS09435 chorismate mutase
Query= SwissProt::Q57696
(99 letters)
>NCBI__GCF_000191585.1:WP_013645480.1
Length = 97
Score = 67.4 bits (163), Expect = 4e-17
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 5 LAEIRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEH 64
L E R KIDE+D ++ L+ +R LA+D+ K LGI I D +RE YI+++I+++ +E
Sbjct: 10 LQESRTKIDEMDELLIDLVEKRTLLARDIVNAKLVLGIEIEDKKREAYIHEKIKQIAREK 69
Query: 65 NVDENIGIKIFQILIEHNKALQKQYL 90
N+DE I +IL + +K Q + L
Sbjct: 70 NIDEVSLTSIIKILTDMSKKEQNKIL 95
Lambda K H
0.315 0.136 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 97
Length adjustment: 10
Effective length of query: 89
Effective length of database: 87
Effective search space: 7743
Effective search space used: 7743
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.6 bits)
S2: 39 (19.6 bits)
Align candidate WP_013645480.1 METBO_RS09435 (chorismate mutase)
to HMM TIGR01791 (chorismate mutase (EC 5.4.99.5))
../bin/blast/fastacmd -i /tmp/list.6625.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.6625.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.