Alignments for a candidate for trpD_1 in Desulfobacca acetoxidans DSM 11109

Align Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27 (characterized)
to candidate WP_013706780.1 DESAC_RS09140 aminodeoxychorismate/anthranilate synthase component II

Query= SwissProt::P28819
         (194 letters)



>NCBI__GCF_000195295.1:WP_013706780.1
          Length = 203

 Score =  249 bits (636), Expect = 2e-71
 Identities = 121/189 (64%), Positives = 146/189 (77%)

Query: 1   MILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSPDFLMISPGPCSPDEAG 60
           ++++IDNYDSFTYNLVQYLG LG  L V RND I +  +EEL P  L+ISPGPCSP EAG
Sbjct: 6   LMVVIDNYDSFTYNLVQYLGMLGARLTVFRNDKIDLVGLEELHPTHLIISPGPCSPKEAG 65

Query: 61  ISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAERLMHGKTSDIEHDGKTIFEGLKN 120
           IS+ AI+HFAG+IPI GVCLGHQSI + FGG ++R+ RLMHGKTS I HDG+ IF+G+ +
Sbjct: 66  ISVAAIRHFAGRIPILGVCLGHQSIGEAFGGRIIRSPRLMHGKTSLIYHDGQDIFQGIPS 125

Query: 121 PLVATRYHSLIVKPETLPSCFTVTAQTKEGEIMAIRHNDLPIEGVQFHPESIMTSFGKEM 180
           P  ATRYHSLIV+ ET P C  V+AQT  GEIM +RH    I GVQFHPESI+T+ G  +
Sbjct: 126 PFEATRYHSLIVERETFPQCLEVSAQTAVGEIMGLRHKTHAIFGVQFHPESILTAEGMNI 185

Query: 181 LRNFIETYR 189
           LRNFI+  R
Sbjct: 186 LRNFIKRQR 194


Lambda     K      H
   0.320    0.139    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 154
Number of extensions: 4
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 203
Length adjustment: 20
Effective length of query: 174
Effective length of database: 183
Effective search space:    31842
Effective search space used:    31842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)

Align candidate WP_013706780.1 DESAC_RS09140 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.9198.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.9198.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.