Align threonine synthase (EC 4.2.3.1) (characterized)
to candidate WP_013819451.1 METME_RS14265 threonine synthase
Query= BRENDA::O66740 (352 letters) >NCBI__GCF_000214665.1:WP_013819451.1 Length = 364 Score = 401 bits (1031), Expect = e-116 Identities = 195/355 (54%), Positives = 265/355 (74%), Gaps = 7/355 (1%) Query: 3 RWQGIIKQYKKYLPVDENTPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSF 62 R+ G+I++Y+ LPV +T +++L EGNTPLI +N+ R IG IY+K+EGLNPTGSF Sbjct: 6 RYTGLIERYRDRLPVSADTRLISLCEGNTPLIRLENIPRLIGKDVDIYVKFEGLNPTGSF 65 Query: 63 KDRGMTLAISKAVEAGKRAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQA 122 KDRGMT+A++KAVE G +A+ICASTGNTSASAAAYA RAG++A+VL+P+G +A+GKL+Q Sbjct: 66 KDRGMTMAVTKAVEEGSQAIICASTGNTSASAAAYAVRAGIKAFVLIPEGKIALGKLAQT 125 Query: 123 MIYGAKVLAIQGTFDDALNIVRKIGENFPVEIVNSVNPYRIEGQKTAAFEICDTLGEAPD 182 ++YGA+++ I G FD +NIV++I ++ PV IVNS+NP+R++GQKTAAFEI D LG APD Sbjct: 126 LMYGAQIIQINGNFDAGMNIVKQIADHAPVAIVNSINPFRLQGQKTAAFEIIDELGGAPD 185 Query: 183 YHFIPVGNAGNITAYWKGFKIYYEE-----GKITKLPRMMGWQAEGAAPIVKGYPIKNPQ 237 YH +PVGNAGNI+AYW G+ Y ++ K P M G+QA GAAP V G I +P+ Sbjct: 186 YHCLPVGNAGNISAYWMGYTEYAQDLPGLPAVADKRPIMCGYQAAGAAPFVAGKMIDHPE 245 Query: 238 TIATAIKIGNPYSWKSALKAAQESGGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVA 297 T+ATAI+IG+P SW A A +ESGG D+ +D +IL A K+++ EGVFCEPASAAS+A Sbjct: 246 TVATAIRIGHPQSWDLAWNAQKESGGWFDSQTDQQILAAQKMLSQYEGVFCEPASAASLA 305 Query: 298 GLIKLVREGFFKGGEVVTCTLTGNGLKDPDTAIKVCEE--PITVPPDFDEVVKVL 350 G ++ + G G + CTLTGNG+KDPD AI C++ P+T+ + D V K + Sbjct: 306 GALQDIGSGKIPEGSRIVCTLTGNGIKDPDIAISQCKDAHPVTIEANLDAVKKAI 360 Lambda K H 0.317 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 431 Number of extensions: 19 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 352 Length of database: 364 Length adjustment: 29 Effective length of query: 323 Effective length of database: 335 Effective search space: 108205 Effective search space used: 108205 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 49 (23.5 bits)
Align candidate WP_013819451.1 METME_RS14265 (threonine synthase)
to HMM TIGR00260 (thrC: threonine synthase (EC 4.2.3.1))
../bin/blast/fastacmd -i /tmp/list.23112.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.23112.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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