Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_013840430.1 DESRU_RS01865 acetolactate synthase small subunit
Query= BRENDA::P9WKJ3
(168 letters)
>NCBI__GCF_000215085.1:WP_013840430.1
Length = 170
Score = 160 bits (405), Expect = 1e-44
Identities = 80/156 (51%), Positives = 113/156 (72%)
Query: 7 TLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQITKQ 66
TL+VLVE+ PGVLARVA LFSRRG+NI+SL VG TE SRMTIVV +D LEQ+TKQ
Sbjct: 4 TLAVLVENSPGVLARVAGLFSRRGYNIDSLTVGRTENPAISRMTIVVEGDDRILEQVTKQ 63
Query: 67 LNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLTVE 126
L+KL++VIKI + V RE+ +IKV AD+ SR ++++ +FRA+++D +LT+E
Sbjct: 64 LHKLVDVIKINDITGSPHVDREMVIIKVGADSASRGEIMQITQIFRASIVDYGHRNLTIE 123
Query: 127 ATGNRGKLEALLRVLEPFGIREIAQSGMVSLSRGPR 162
TGN+ K+ A L PFGI+E+ ++G +++ RG +
Sbjct: 124 CTGNQEKISAFEEALRPFGIKELVRTGKIAVLRGSK 159
Lambda K H
0.315 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 92
Number of extensions: 3
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 170
Length adjustment: 18
Effective length of query: 150
Effective length of database: 152
Effective search space: 22800
Effective search space used: 22800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 43 (21.2 bits)
Align candidate WP_013840430.1 DESRU_RS01865 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.10837.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.10837.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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