Alignments for a candidate for asd in Teredinibacter turnerae T7901

Align Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 (characterized)
to candidate WP_015818862.1 TERTU_RS11080 aspartate-semialdehyde dehydrogenase

Query= SwissProt::Q51344
         (370 letters)



>NCBI__GCF_000023025.1:WP_015818862.1
          Length = 368

 Score =  536 bits (1381), Expect = e-157
 Identities = 268/367 (73%), Positives = 299/367 (81%), Gaps = 1/367 (0%)

Query: 3   RVGLIGWRGMVGSVLMQRMLEERDFDLIEPVFFTTSNVGGQGPEVGKDIAPLKDAYSIDE 62
           +VG +GWRGMVGSVLM RMLEE DF  IEPVFFTTSNVGG  P+VG +   LKDAYSIDE
Sbjct: 2   KVGFVGWRGMVGSVLMGRMLEENDFAGIEPVFFTTSNVGGTAPDVGVEAPALKDAYSIDE 61

Query: 63  LKTLDVILTCQGGDYTSEVFPKLREAGWQGYWIDAASSLRMEDDAVIVLDPVNRKVIDQA 122
           LK LD I++CQGGDYT EVF KLR AGWQGYWIDAASSLRM+ DA+IVLDPVN  VI   
Sbjct: 62  LKQLDAIISCQGGDYTGEVFGKLRAAGWQGYWIDAASSLRMDKDALIVLDPVNDNVIRDG 121

Query: 123 LDAGTRNYIGGNCTVSLMLMALGGLFDAGLVEWMSAMTYQAASGAGAQNMRELLKQMGAA 182
           L  G +NYIGGNCTVSLMLM LGGLF   LVEW SAMTYQAASGAGAQNMREL+ QMG  
Sbjct: 122 LAKGIKNYIGGNCTVSLMLMGLGGLFRENLVEWTSAMTYQAASGAGAQNMRELITQMGQI 181

Query: 183 HASVADDLANPASAILDIDRKVAETLRSEAFPTEHFGAPLGGSLIPWIDKELPNGQSREE 242
             SVA +LA+PASAILDIDRKV E +RS+    + FGAPL GSL+P+IDK+L N QS+EE
Sbjct: 182 RDSVATELADPASAILDIDRKVVEAMRSD-LTVDRFGAPLAGSLLPYIDKQLENFQSKEE 240

Query: 243 WKAQAETNKILARFKNPIPVDGICVRVGAMRCHSQALTIKLNKDVPLTDIEGLISQHNPW 302
           WK   ETNKIL    +PIP+DGICVR+GAMRCHSQALTIKL KDVPL D+E LI+  N W
Sbjct: 241 WKGGVETNKILGTSDSPIPIDGICVRIGAMRCHSQALTIKLKKDVPLADVESLIANANSW 300

Query: 303 VKLVPNHREVSVRELTPAAVTGTLSVPVGRLRKLNMGSQYLGAFTVGDQLLWGAAEPLRR 362
           VK++PN R+ ++ ELTP  VTGTLSVPVGRLRK+ MG +YL AFTVGDQLLWGAAEPLRR
Sbjct: 301 VKVIPNDRDATLEELTPTKVTGTLSVPVGRLRKMAMGPEYLSAFTVGDQLLWGAAEPLRR 360

Query: 363 MLRILLE 369
           MLRIL E
Sbjct: 361 MLRILRE 367


Lambda     K      H
   0.319    0.136    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 483
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 368
Length adjustment: 30
Effective length of query: 340
Effective length of database: 338
Effective search space:   114920
Effective search space used:   114920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)

Align candidate WP_015818862.1 TERTU_RS11080 (aspartate-semialdehyde dehydrogenase)
to HMM TIGR01745 (asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11))

Software error:

../bin/blast/fastacmd -i /tmp/list.18036.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18036.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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