Align acetolactate synthase (subunit 2/2) (EC 2.2.1.6) (characterized)
to candidate WP_015818963.1 TERTU_RS04690 acetolactate synthase 3 large subunit
Query= BRENDA::P00893
(574 letters)
>NCBI__GCF_000023025.1:WP_015818963.1
Length = 578
Score = 726 bits (1874), Expect = 0.0
Identities = 353/580 (60%), Positives = 441/580 (76%), Gaps = 8/580 (1%)
Query: 1 MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADG 60
ME LSG ++++RSL D+GV+ VFGYPGGA L IYDA+ + HVLVRHEQAA H ADG
Sbjct: 1 MEKLSGGDILIRSLADEGVETVFGYPGGAALHIYDAIFRQKQVKHVLVRHEQAATHAADG 60
Query: 61 LARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVG 120
AR+TG+ GVVLVTSGPGATNAITGIATAYMDSIP+VV+SGQV + IG DAFQE DMVG
Sbjct: 61 YARSTGKTGVVLVTSGPGATNAITGIATAYMDSIPMVVISGQVVSDKIGEDAFQETDMVG 120
Query: 121 ISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESV 180
+SRP+VKHSFLVK +DI + +KKAF++A++GRPGPVV+D+PKDI NP +K+ Y +PE +
Sbjct: 121 VSRPIVKHSFLVKDQKDIAETVKKAFYIASTGRPGPVVIDIPKDITNPVDKVEYHYPEKI 180
Query: 181 SMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCS 240
+RSY P + GH GQIK+A+Q ++ A++P++Y GGG + QL + LN PV +
Sbjct: 181 KLRSYTPASKGHSGQIKKAVQLMLTARRPMIYAGGGVVQGNASAQLTAIAQMLNFPVTNT 240
Query: 241 LMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATV 300
LMGLGA+P T RQ LGMLGMHGT EAN MH+ADVIFAVG RFDDR TN +K+CP+A +
Sbjct: 241 LMGLGAYPGTDRQFLGMLGMHGTVEANTAMHHADVIFAVGARFDDRVTNTPSKFCPSAKI 300
Query: 301 LHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRAR 360
+H+DIDP SISKTV ADIPIVG VL++ML LL++ + I WW++I++WR R
Sbjct: 301 IHVDIDPASISKTVAADIPIVGPVESVLDEMLSLLNETNERPDAKAIAGWWKEIDEWRNR 360
Query: 361 QCL----KYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWIN 416
+ +YDT + + PQ V+ L+ +T GDAYV SDVGQHQMF+A YY FDKPRRWIN
Sbjct: 361 YGILTKPRYDTSGDMLMPQEVVRALFEVTNGDAYVCSDVGQHQMFSAQYYQFDKPRRWIN 420
Query: 417 SGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNR 476
SGGLGTMGFGLPAA+GV+MA + V CVTG+GSIQM IQELST QY LPV ++ LNN+
Sbjct: 421 SGGLGTMGFGLPAAMGVQMAHRDAVVACVTGEGSIQMCIQELSTCTQYHLPVKIICLNNQ 480
Query: 477 YLGMVKQWQDMIYSGRHSQS-YMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQV 535
LGMVKQWQDM Y R+S+S Y SLPDFV+L +AYGHVG++++ EL++KL E
Sbjct: 481 ALGMVKQWQDMQYDSRYSESLYEDSLPDFVKLMDAYGHVGMRVTKRDELKAKLEECF--A 538
Query: 536 RNNRLVFVDVTVDGSEHVYPMQIR-GGGMDEMWLSKTERT 574
+R VF+D+ VD EHVYPMQ+ G M +MWLSKTERT
Sbjct: 539 MKDRCVFMDIYVDPKEHVYPMQVAPNGSMRDMWLSKTERT 578
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 982
Number of extensions: 29
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 578
Length adjustment: 36
Effective length of query: 538
Effective length of database: 542
Effective search space: 291596
Effective search space used: 291596
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_015818963.1 TERTU_RS04690 (acetolactate synthase 3 large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.18650.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18650.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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