Alignments for a candidate for argE in Teredinibacter turnerae T7901

Align Acetylornithine deacetylase; AO; Acetylornithinase; N-acetylornithinase; NAO; EC 3.5.1.16 (characterized)
to candidate WP_015820284.1 TERTU_RS01675 acetylornithine deacetylase

Query= SwissProt::P23908
         (383 letters)



>NCBI__GCF_000023025.1:WP_015820284.1
          Length = 388

 Score =  351 bits (901), Expect = e-101
 Identities = 178/370 (48%), Positives = 244/370 (65%), Gaps = 5/370 (1%)

Query: 15  LIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASIGQGAGG 74
           LIA PS+S T   LD SN +++ LLA+W     F VE Q +P   NK N++A+ G G GG
Sbjct: 14  LIAQPSVSCTSPQLDMSNRNVVELLAEWLAAKQFQVEFQELPD--NKANLIATRGSGPGG 71

Query: 75  LLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVD--VTKL 132
           L+L+GHTDTVP +  RW +DPFTL+  D + YGLG  DMKGFF  +L AL  +D  + KL
Sbjct: 72  LVLSGHTDTVPCNPDRWEQDPFTLSSRDNRFYGLGATDMKGFFPVVLAALDRLDEHLDKL 131

Query: 133 KKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQ 192
           ++P+ +LATADEE+SM+GAR   +    +   A+IGEPT + P+R HKG +  AIRIQG 
Sbjct: 132 QQPVIVLATADEESSMSGARALVKAGLPKARYAVIGEPTCMHPIRMHKGIMMEAIRIQGL 191

Query: 193 SGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNR 252
           +GHSS+PA G NA+E MH  +G +L+ R  ++ +Y  + F +P+PTLN G+IHGGD  NR
Sbjct: 192 AGHSSNPALGHNAMESMHAVLGELLKFRSEIQAKYSNQGFAIPFPTLNPGYIHGGDNPNR 251

Query: 253 ICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQ 312
           IC  CE+H D+RPLPGM + +L+  L   L P+ +     LT++ L   I  YE   + +
Sbjct: 252 ICGHCEMHFDLRPLPGMDIGDLHHQLEQRLTPIGDAHNTPLTLENLIGGIDAYEQSADSE 311

Query: 313 LVEVVEKLLGAKTEVVNYCTEAPFIQTL-CPTLVLGPGSINQAHQPDEYLETRFIKPTRE 371
           LV + EKL G K+E V + TEAPF+Q L   TLV+GPGSI+QAHQP+EY+    + P  +
Sbjct: 312 LVLLAEKLTGFKSESVAFATEAPFLQKLGMQTLVMGPGSIDQAHQPNEYMAHEQVAPAVD 371

Query: 372 LITQVIHHFC 381
           +I  +I   C
Sbjct: 372 VIANLITQLC 381


Lambda     K      H
   0.320    0.139    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 421
Number of extensions: 25
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 388
Length adjustment: 30
Effective length of query: 353
Effective length of database: 358
Effective search space:   126374
Effective search space used:   126374
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)

Align candidate WP_015820284.1 TERTU_RS01675 (acetylornithine deacetylase)
to HMM TIGR01892 (argE: acetylornithine deacetylase (ArgE) (EC 3.5.1.16))

Software error:

../bin/blast/fastacmd -i /tmp/list.1294.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.1294.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.