Alignments for a candidate for hisC in Nocardiopsis lucentensis DSM 44048

Align Histidinol-phosphate aminotransferase 1; EC 2.6.1.9; Imidazole acetol-phosphate transaminase 1 (uncharacterized)
to candidate WP_017599139.1 D471_RS0113730 histidinol-phosphate transaminase

Query= curated2:Q46Y48
         (376 letters)



>NCBI__GCF_000341125.1:WP_017599139.1
          Length = 360

 Score =  233 bits (594), Expect = 6e-66
 Identities = 138/326 (42%), Positives = 183/326 (56%), Gaps = 9/326 (2%)

Query: 45  VKLASNENPLGMPESAKHAAAAAIAELGRYPDSNGFELKAALSTKLGVPQDWLTLGNGSN 104
           +KL+SNE+P G   S + A A A AEL RYPD     L   L+  LGVP++ + LG GS 
Sbjct: 34  IKLSSNESPFGPLPSVREAVAQASAELNRYPDPGATALVTELARHLGVPEEHVALGAGSV 93

Query: 105 DILELAAHALVTPGQSIVYAEYSFAVYALATQEIGARAIVVKARDYGHDLDAMAAAITSD 164
            +L+    A+  PG  +VYA  SF  Y L  +  G  ++ V  RD  HDLDA+A AIT  
Sbjct: 94  GLLQQLLEAVGEPGAEVVYAWRSFEAYPLLAELAGVTSVRVPLRDETHDLDAIADAITES 153

Query: 165 TRLVFIANPNNPTGTFVPAAALETFLAKVPAEVVVVLDEAYNEYLDDDQQYDSVAWVRRY 224
           TR+V + NPNNPTGT VP   L  FL +VP  V+V+LDEAY+EY+ D +  D V   R  
Sbjct: 154 TRMVLVCNPNNPTGTTVPKGELLAFLDRVPEHVLVILDEAYHEYVRDPRVPDGVELYRDR 213

Query: 225 PNLLVSRTFSKAYGLAGLRIGYAVAQPELTDLLNRIRQPFNVNSVAQAAAVAALGDTAFL 284
           PN+ V RTFSKAYGLA +R+GY VA P +     +   PF VN +AQAA +A+L     L
Sbjct: 214 PNVAVLRTFSKAYGLAAVRLGYLVAHPHVAAAARKTLVPFAVNHLAQAAGIASLAARDEL 273

Query: 285 QRSAELNRAGKAQLVEAFSRLGLEFVASSGNFVLVRVGDDD-DAGARVNVALLRQGVIVR 343
               E     + ++ +A    G     +  NFV +RVG+D  D  A       + GV VR
Sbjct: 274 MERVEATVGERTRVRDALIASGWTVPPTEANFVWLRVGEDTLDFAAE----CAKVGVSVR 329

Query: 344 PVGNYGMPRWLRVTIGLPDENAAFIA 369
           P    G     RV++G P+EN  F++
Sbjct: 330 PFEGEG----ARVSLGTPEENDVFLS 351


Lambda     K      H
   0.318    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 336
Number of extensions: 9
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 360
Length adjustment: 30
Effective length of query: 346
Effective length of database: 330
Effective search space:   114180
Effective search space used:   114180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate WP_017599139.1 D471_RS0113730 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.8358.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8358.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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