Align 2-isopropylmalate synthase (EC 2.3.3.13) (characterized)
to candidate WP_017599576.1 D471_RS0116110 2-isopropylmalate synthase
Query= BRENDA::P9WQB3
(644 letters)
>NCBI__GCF_000341125.1:WP_017599576.1
Length = 566
Score = 675 bits (1741), Expect = 0.0
Identities = 354/609 (58%), Positives = 426/609 (69%), Gaps = 49/609 (8%)
Query: 36 QRASSMPVNRYRPFAEEVEPIRLRNRTWPDRVIDRAPLWCAVDLRDGNQALIDPMSPARK 95
Q+ SSMP RY+PF +P+ L +RTWP R I AP W + DLRDGNQ+LI+PM ARK
Sbjct: 5 QQPSSMPFQRYQPF----KPVDLPDRTWPSRTITEAPRWLSTDLRDGNQSLIEPMDNARK 60
Query: 96 RRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTF 155
R MF+LLV+MGYKEIEVGFP+ASQTDFDFVR +IE IPDDV I VLTQ R +LIERT
Sbjct: 61 REMFELLVKMGYKEIEVGFPAASQTDFDFVRSLIEDDLIPDDVQISVLTQAREDLIERTV 120
Query: 156 QACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQ--WRF 213
Q+ GA R+ VH YN+T+ RRVVFR +R + + IA +G R + A +Y G + +
Sbjct: 121 QSLVGAKRSTVHLYNATAPTFRRVVFRVDRDQCKDIAVEGTRHVMRFAEQYLGETEYFGY 180
Query: 214 EYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRN 273
EYSPE + TEL++A +VC+AV +V P P R II NLPATVE TPNVYAD IEWMSRN
Sbjct: 181 EYSPEIFVDTELDFALEVCEAVMDVWRPGPGREIILNLPATVERATPNVYADQIEWMSRN 240
Query: 274 LANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNGERTGNVCLVTLGLNLFS 333
L RE V++S+HPHNDRGT VA+AEL AGADR+EGCLFG+GERTGNVCLVTLGLNLFS
Sbjct: 241 LTRREHVVVSVHPHNDRGTGVASAELAVMAGADRVEGCLFGHGERTGNVCLVTLGLNLFS 300
Query: 334 RGVDPQIDFSNIDEIRRTVEYCNQLPVHERHPYGGDLVYTAFSGSHQDAINKGLDAMKLD 393
+GVDP+IDFS+IDEIRRTVE+C QLPV RHPYGGDLVYTAFSGSHQDAI KG A++ +
Sbjct: 301 QGVDPRIDFSDIDEIRRTVEHCTQLPVAPRHPYGGDLVYTAFSGSHQDAIKKGFTALQAE 360
Query: 394 ADAADCDVDDMLWQVPYLPIDPRDVGRTYEAVIRVNSQSGKGGVAYIMKTDHGLSLPRRL 453
A AA VD+ W VPYLPIDP+DVGR YEAVIRVNSQSGKGGV+YIM+ DH L LPRRL
Sbjct: 361 AAAAGTPVDEYPWDVPYLPIDPKDVGRNYEAVIRVNSQSGKGGVSYIMQRDHALDLPRRL 420
Query: 454 QIEFSQVIQKIAEGTAGEGGEVSPKEMWDAFAEEYLAPVRPLERIRQHVDAADDDGGTTS 513
QIEFS+VIQ E T EGGE + + +W+ F++ YLA P+ + A+D GT
Sbjct: 421 QIEFSRVIQ---EHTDAEGGEFAGERIWEIFSDTYLAESGPVAVLAHRSTTAED--GTYR 475
Query: 514 ITATVKINGVETEISGSGNGPLAAFVHALADVGFDVAVLDYYEHAMSAGDDAQAAAYVEA 573
I A ++NG E++G+GNGP++AF AL DV V V+DY EH++ DA+AAAYVEA
Sbjct: 476 IEADARVNGEIRELTGTGNGPISAFCDALTDVDVKVRVMDYVEHSLGGDGDARAAAYVEA 535
Query: 574 SVTIASPAQPGEAGRHASDPVTIASPAQPGEAGRHASDPVTSKTVWGVGIAPSITTASLR 633
+ VWGVGI SITTASL+
Sbjct: 536 E--------------------------------------IDGNVVWGVGIHNSITTASLK 557
Query: 634 AVVSAVNRA 642
AV SA+ RA
Sbjct: 558 AVCSAIGRA 566
Lambda K H
0.317 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 979
Number of extensions: 36
Number of successful extensions: 6
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 644
Length of database: 566
Length adjustment: 37
Effective length of query: 607
Effective length of database: 529
Effective search space: 321103
Effective search space used: 321103
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)
Align candidate WP_017599576.1 D471_RS0116110 (2-isopropylmalate synthase)
to HMM TIGR00970 (leuA: 2-isopropylmalate synthase (EC 2.3.3.13))
../bin/blast/fastacmd -i /tmp/list.2733.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.2733.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.