Alignments for a candidate for proC in Nocardiopsis lucentensis DSM 44048

Align Pyrroline-5-carboxylate reductase 1; P5C reductase 1; P5CR 1; PCA reductase 1; EC 1.5.1.2 (characterized)
to candidate WP_017601083.1 D471_RS0124645 pyrroline-5-carboxylate reductase

Query= SwissProt::P0CI77
         (297 letters)



>NCBI__GCF_000341125.1:WP_017601083.1
          Length = 264

 Score =  192 bits (489), Expect = 5e-54
 Identities = 106/264 (40%), Positives = 160/264 (60%), Gaps = 3/264 (1%)

Query: 19  VAFIGAGSMAEGMISGIVRANKIPKQNICVTNRSNTERLTELELQYGIKGALPNQLCIED 78
           +A IGAG M E +++G++     P +++ VT     E   EL  +YG++  +P+    + 
Sbjct: 2   IAIIGAGKMGEALLAGMLATGHAP-EDVLVTE-PRVEHADELRQRYGVE-VVPSADAAKR 58

Query: 79  MDVLILAMKPKDAENALSSLKSRIQPHQLILSVLAGITTSFIEQSLLNEQPVVRVMPNTS 138
            D L+LA+KP+D  + L  L   + P +L++SV AG+TTS +E  L    PVVR MPNT 
Sbjct: 59  ADTLLLALKPQDMVDLLEELSPHLSPDRLVISVAAGLTTSVMESHLPVGVPVVRAMPNTP 118

Query: 139 SMIGASATAIALGKYVSEDLKKLAEALLGCMGEVYTIQENQMDIFTGIAGSGPAYFYYLM 198
           +++G   TAIA G    +     AE LLG +GEV  + E  MD  T I+GSGPAYFY++ 
Sbjct: 119 ALMGRGMTAIAGGANTDQAHLARAEDLLGAVGEVIRVGEQHMDTVTAISGSGPAYFYFIA 178

Query: 199 EFIEKTGEEAGLDKQLSRSIGAQTLLGAAKMLMETGEHPEILRDNITSPNGTTAAGLQAL 258
           E + + G   G+ +  ++ +  QT+ GAA ML ++GEHP +LR+ +TSP GTTAA L+ L
Sbjct: 179 ETMVEAGVAMGMPRATAQKLVEQTMTGAAAMLTDSGEHPVVLREAVTSPGGTTAAALREL 238

Query: 259 KKSGGGEAISQAIKHAAKRSKEIS 282
           ++ G   A + AI+ A  RS+ +S
Sbjct: 239 ERHGVRTAFTDAIEAARDRSRALS 262


Lambda     K      H
   0.314    0.131    0.352 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 222
Number of extensions: 6
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 264
Length adjustment: 26
Effective length of query: 271
Effective length of database: 238
Effective search space:    64498
Effective search space used:    64498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.7 bits)

Align candidate WP_017601083.1 D471_RS0124645 (pyrroline-5-carboxylate reductase)
to HMM TIGR00112 (proC: pyrroline-5-carboxylate reductase (EC 1.5.1.2))

Software error:

../bin/blast/fastacmd -i /tmp/list.22242.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22242.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.