Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_018125421.1 B149_RS0112070 biosynthetic-type acetolactate synthase large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000375485.1:WP_018125421.1
Length = 563
Score = 642 bits (1657), Expect = 0.0
Identities = 324/567 (57%), Positives = 412/567 (72%), Gaps = 10/567 (1%)
Query: 18 EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
EM GA+IL+ L +EGV+ ++G+PGGAV+ IYDE+ EH+LVRHEQ A+HAADGYA
Sbjct: 2 EMTGAQILLKCLEKEGVDVMFGFPGGAVIDIYDEI-PNFSVEHVLVRHEQGAIHAADGYA 60
Query: 78 RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
RATGK GV LVTSGPG TN VTGIATAY+DSIP+VV TG VPT IG DAFQE D VGIT
Sbjct: 61 RATGKAGVCLVTSGPGATNTVTGIATAYMDSIPVVVFTGQVPTPLIGNDAFQEVDIVGIT 120
Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS 197
RP KH++LV DV DLA T+++AFF+A +GRPGPV+VD+PKDV CK+E+P+ + MRS
Sbjct: 121 RPCTKHSYLVTDVNDLARTVRQAFFLARSGRPGPVLVDLPKDVMNRKCKFEWPEDVSMRS 180
Query: 198 YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGL 257
YNP K H GQ+RK L++ AERP IY+GGGVVL+ + +ELR L+ G PVT+TLMGL
Sbjct: 181 YNPNVKPHVGQVRKVAKLIRNAERPLIYSGGGVVLSKSHEELRWLSDKLGIPVTSTLMGL 240
Query: 258 GAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHI 317
GA+PG ++GMLGMHGTY ANMA+ +CD+L+A+GARFDDRV G + F A I+HI
Sbjct: 241 GAYPGDGDNWLGMLGMHGTYAANMAVNHCDLLLAVGARFDDRVTGKVSTFAPHA-TIVHI 299
Query: 318 DIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKA----SDIKPKREALAKWWEQIEQWRS 373
D+DP+SI K V V +P+V + K L L +++A D K + +WW Q+++W
Sbjct: 300 DVDPTSIQKNVSVHVPLVADCKSALASLKKEMQALHDQEDWSLKHD---EWWCQLKEWDR 356
Query: 374 VDCLKYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGG 433
+ L Y+ + IKPQYVVE I ++T+G+A I ++VGQ+QMWAAQF K EP R++ SGG
Sbjct: 357 MHPLTYNDVEDGIKPQYVVEMIQDITEGEAIIATEVGQNQMWAAQFLKVKEPNRFLTSGG 416
Query: 434 LGTMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLG 493
LGTMG G P AMG +KAFP+K VV I G+GSIQM IQE+ T + PVKI LNNG+LG
Sbjct: 417 LGTMGYGFPAAMGAQKAFPDKLVVDIAGDGSIQMNIQEMMTVVCNKLPVKIVILNNGFLG 476
Query: 494 MVRQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTV 553
MVRQWQE+ YD Y + MDA PDFVKLAEAYG G R+ + DV P L++AF D+
Sbjct: 477 MVRQWQELFYDRNYCETCMDAQPDFVKLAEAYGAEGYRITQKKDVGPVLKKAFS-TDKPA 535
Query: 554 FLDFQTDPTENVWPMVQAGKGISEMLL 580
+D + ENV+PMV AG ++EMLL
Sbjct: 536 IIDVRVTNEENVYPMVPAGASLTEMLL 562
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 945
Number of extensions: 35
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 563
Length adjustment: 36
Effective length of query: 549
Effective length of database: 527
Effective search space: 289323
Effective search space used: 289323
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_018125421.1 B149_RS0112070 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.8726.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8726.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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