Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_018232002.1 THITHI_RS0105115 acetolactate synthase 3 large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000378965.1:WP_018232002.1
Length = 564
Score = 806 bits (2081), Expect = 0.0
Identities = 385/563 (68%), Positives = 456/563 (80%), Gaps = 1/563 (0%)
Query: 18 EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
E+ GAEI V L EEGV+ ++GYPGGAVL+IYD L+KQ K HILVRHEQ A+HAA+GYA
Sbjct: 2 ELTGAEIFVRCLQEEGVDLIFGYPGGAVLHIYDALYKQDKVAHILVRHEQGAIHAAEGYA 61
Query: 78 RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
++T K GVALVTSGPG TNA+TGIA AY+DS+P+VV TG VPTH IG DAFQE DTVGIT
Sbjct: 62 KSTDKPGVALVTSGPGATNAITGIADAYMDSVPLVVFTGQVPTHLIGNDAFQEVDTVGIT 121
Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS 197
RP VKHNFLVKDV+DLA T+KKAF++A TGRPGPVVVDIPKDV+ C+Y YPK+I MRS
Sbjct: 122 RPCVKHNFLVKDVKDLATTLKKAFYVATTGRPGPVVVDIPKDVTAAKCEYSYPKTIRMRS 181
Query: 198 YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGL 257
YNP KGH+GQIRKA+ L+ A +P IY GGGV+L A+ L L G+P+TNTLMGL
Sbjct: 182 YNPTVKGHTGQIRKAIDLILEARQPIIYAGGGVILGRAAKSLTDFTRLLGYPITNTLMGL 241
Query: 258 GAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHI 317
G +P T K VGMLGMHGTYEANMAM + D++IAIGARFDDRV GN F A KI+H+
Sbjct: 242 GGYPATDKLSVGMLGMHGTYEANMAMHHADLVIAIGARFDDRVTGNIEKFCPYA-KIVHV 300
Query: 318 DIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDCL 377
D+DP+SISK VKVD+PIVG V VL+ +I +IKA KP AL WW+QI +WR++DCL
Sbjct: 301 DVDPASISKNVKVDVPIVGQVDTVLKAMIKEIKADPRKPDAAALKAWWKQIGEWRAMDCL 360
Query: 378 KYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLGTM 437
KYDR+SE+IKPQYV+E +W+LTKGDAF+ SDVGQHQMWAAQFYKFD+P RWINSGGLGTM
Sbjct: 361 KYDRNSELIKPQYVLETLWKLTKGDAFVTSDVGQHQMWAAQFYKFDKPNRWINSGGLGTM 420
Query: 438 GVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMVRQ 497
G GLP AMG++ A P+ V +TGE SIQMCIQELSTCLQY P+K+ +LNN Y+GMVRQ
Sbjct: 421 GFGLPAAMGVQLAHPKATVACVTGEASIQMCIQELSTCLQYQLPIKVVNLNNRYMGMVRQ 480
Query: 498 WQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFLDF 557
WQE Y RY+ SYMDALPDFV LAEAYGHVGMR+EK +DVE AL+EA +LKDR VF+DF
Sbjct: 481 WQEFFYQGRYAMSYMDALPDFVVLAEAYGHVGMRIEKPADVEGALKEALKLKDRLVFMDF 540
Query: 558 QTDPTENVWPMVQAGKGISEMLL 580
TD +ENV+PM+ AG G +EM+L
Sbjct: 541 ITDQSENVYPMIPAGAGQNEMIL 563
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1025
Number of extensions: 32
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 564
Length adjustment: 36
Effective length of query: 549
Effective length of database: 528
Effective search space: 289872
Effective search space used: 289872
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_018232002.1 THITHI_RS0105115 (acetolactate synthase 3 large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.3097.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.3097.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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