Alignments for a candidate for asp-kinase in Methylovulum miyakonense HT12

Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_019868370.1 METMI_RS0121545 aspartate kinase

Query= BRENDA::O69077
         (412 letters)



>NCBI__GCF_000384075.1:WP_019868370.1
          Length = 408

 Score =  582 bits (1499), Expect = e-171
 Identities = 305/405 (75%), Positives = 342/405 (84%), Gaps = 2/405 (0%)

Query: 1   MALIVQKFGGTSVGTVERIEQVAEKVKKFREAGDDVVVVVSAMSGETNRLIGLANQIMEQ 60
           MAL V KFGGTSVGTVERI+ VAEKVKK  + GD +VVVVSAMSGETNRLIG+A ++  Q
Sbjct: 1   MALYVYKFGGTSVGTVERIKAVAEKVKKAHDLGDQIVVVVSAMSGETNRLIGMAKEMQVQ 60

Query: 61  PVPRELDVMVSTGEQVTIALLSMALIKRGVPAVSYTGNQVRILTDSAHTKARILHIDDTH 120
           P  RE+DV++STGEQVT+ALLSMAL + G  A SYTG QV+ILTDS+HTKARI  IDD+ 
Sbjct: 61  PTEREMDVLISTGEQVTVALLSMALHEIGCDACSYTGGQVKILTDSSHTKARIRKIDDSR 120

Query: 121 IRADLKAGRVVVVAGFQGVDGNGNITTLGRGGSDTTGVALAAALKADECQIYTDVDGVYT 180
           I A LK G+VVVVAGFQGVD + NITTLGRGGSDTT VALAAALKADEC I+TDVDGVYT
Sbjct: 121 IHAHLKQGKVVVVAGFQGVDEHDNITTLGRGGSDTTAVALAAALKADECLIFTDVDGVYT 180

Query: 181 TDPRVVPQARRLDKITFEEMLEMASLGSKVLQIRAVEFAGKYNVPLRVLHSFQEGPGTLI 240
           TDPRV P+ARRLD+ITFEEMLEMASLGSKVLQIR+VEFAGKYNV LRVL SF EG GTLI
Sbjct: 181 TDPRVEPKARRLDRITFEEMLEMASLGSKVLQIRSVEFAGKYNVALRVLSSFTEGNGTLI 240

Query: 241 TIDDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISAANVEVDMIVQNVA 300
           T   EE  ME  +ISGIAFNRDEAKLTI GVPD PGVA  ILGPI+ AN+EVDMI+QN+A
Sbjct: 241 TY--EESPMESALISGIAFNRDEAKLTITGVPDRPGVASTILGPIADANIEVDMIIQNIA 298

Query: 301 HDNTTDFTFTVHRNDYLNALEILKQTAANIGAREAIGDTNIAKVSIVGVGMRSHAGVASR 360
            D TTDFTFT+HRNDY  A  IL+QT A++GAR   GD  I KVSIVGVGMRSHAG+AS 
Sbjct: 299 DDATTDFTFTIHRNDYQRAKTILEQTCADLGARAVTGDDTIVKVSIVGVGMRSHAGIAST 358

Query: 361 MFEALAKESINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELD 405
           MF+ LA E INI+MISTSEIK+SVV++EKY+ELAVRALH AF+LD
Sbjct: 359 MFKTLASEGINIRMISTSEIKISVVVDEKYMELAVRALHAAFKLD 403


Lambda     K      H
   0.317    0.133    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 547
Number of extensions: 17
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 408
Length adjustment: 31
Effective length of query: 381
Effective length of database: 377
Effective search space:   143637
Effective search space used:   143637
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)

Align candidate WP_019868370.1 METMI_RS0121545 (aspartate kinase)
to HMM TIGR00656 (aspartate kinase, monofunctional class (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.7218.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.7218.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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