Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_020174279.1 A3OQ_RS0105055 phosphoribosyl-ATP diphosphatase
Query= reanno::Caulo:CCNA_03854
(107 letters)
>NCBI__GCF_000385335.1:WP_020174279.1
Length = 109
Score = 92.4 bits (228), Expect = 1e-24
Identities = 58/102 (56%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 6 TDVLQRLAATIEARKGGDPSVSYTAKLLN-DPALAAKKLGEEAVETVIAAVAQGSDALAA 64
T L LAA I AR G + SYT LL PA AKKLGEEAVETVIAAV AL
Sbjct: 3 TFTLTDLAAIISARAGAAAASSYTKSLLEAGPARVAKKLGEEAVETVIAAVQSDRAALIC 62
Query: 65 ESADLLYHWLALMAASGVSLDAVAEKLEAREGTSGIAEKASR 106
ESADLLYH L L ASG+S+ V +LE R SG EKA+R
Sbjct: 63 ESADLLYHLLVLFQASGISMQEVLAELERRTQQSGHEEKAAR 104
Lambda K H
0.309 0.122 0.317
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 109
Length adjustment: 12
Effective length of query: 95
Effective length of database: 97
Effective search space: 9215
Effective search space used: 9215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 40 (20.0 bits)
Align candidate WP_020174279.1 A3OQ_RS0105055 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.25562.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.25562.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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