Alignments for a candidate for trpD_1 in Methyloferula stellata AR4T

Align Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 (characterized)
to candidate WP_020175706.1 A3OQ_RS0112365 aminodeoxychorismate/anthranilate synthase component II

Query= SwissProt::P26922
         (196 letters)



>NCBI__GCF_000385335.1:WP_020175706.1
          Length = 199

 Score =  243 bits (620), Expect = 2e-69
 Identities = 120/184 (65%), Positives = 143/184 (77%), Gaps = 2/184 (1%)

Query: 4   LIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICL 63
           LIDNYDSFT+NLVHYLG LGAE+ V RND ++V + +A RP+ IVLSPGPC P +AGICL
Sbjct: 5   LIDNYDSFTFNLVHYLGALGAEVSVHRNDKISVADVLAARPDAIVLSPGPCTPHEAGICL 64

Query: 64  PLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLPSPF 123
            LI+AA++   P+ GVCLGHQAIG   GG VVRAP+P+HGK+  + HQG  V   L  PF
Sbjct: 65  DLINAASETT-PIFGVCLGHQAIGAALGGDVVRAPLPVHGKLSLIDHQGETVFHGLNQPF 123

Query: 124 RATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHKILE 183
           +ATRYHSL+VERATLP  L++T ET DGLIM LSH+  P+HGVQFHPESI SE G  IL 
Sbjct: 124 KATRYHSLVVERATLPDELKITAET-DGLIMGLSHKTRPLHGVQFHPESIASEQGPLILR 182

Query: 184 NFLN 187
           NFL+
Sbjct: 183 NFLD 186


Lambda     K      H
   0.321    0.140    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 195
Number of extensions: 9
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 196
Length of database: 199
Length adjustment: 20
Effective length of query: 176
Effective length of database: 179
Effective search space:    31504
Effective search space used:    31504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)

Align candidate WP_020175706.1 A3OQ_RS0112365 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.25678.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.25678.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.