Align Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized)
to candidate WP_020564704.1 A3OW_RS0117285 ketol-acid reductoisomerase
Query= SwissProt::C1DFH7
(338 letters)
>NCBI__GCF_000372865.1:WP_020564704.1
Length = 338
Score = 552 bits (1423), Expect = e-162
Identities = 277/338 (81%), Positives = 301/338 (89%)
Query: 1 MKVYYDKDCDLSIIQSKKVAIIGYGSQGHAHACNLKDSGVDVYVGLRAGSASVAKAEAHG 60
M+VYYDKD DLSII++KKVAIIGYGSQGHAHA NLKDSGVDV VGLR GS SVAKA+A G
Sbjct: 1 MQVYYDKDADLSIIKAKKVAIIGYGSQGHAHANNLKDSGVDVVVGLRPGSPSVAKAQACG 60
Query: 61 LTVKSVKDAVAAADVVMILTPDEFQGRLYKDEIEPNLKKGATLAFAHGFSIHYNQVVPRA 120
L VK V AV ADVVMILTPDEFQ RLYK+EIEPN+K+GA LAFAHGFSI YNQ+VPRA
Sbjct: 61 LVVKDVPAAVTGADVVMILTPDEFQSRLYKEEIEPNIKQGAALAFAHGFSILYNQIVPRA 120
Query: 121 DLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAVYQDASGNAKNLALSYACGVGGGRTGIIE 180
DLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAV++DASG+AK + LSYA +GGGR+GIIE
Sbjct: 121 DLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAVHKDASGSAKAICLSYASAIGGGRSGIIE 180
Query: 181 TTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMFE 240
TTF+DE ETDLFGEQAVLCGG VELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLM+E
Sbjct: 181 TTFRDEAETDLFGEQAVLCGGAVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMYE 240
Query: 241 GGIANMNYSISNNAEYGEYVTGPEVINEQSRQAMRNALKRIQDGEYAKMFITEGAANYPS 300
GGIANMNYSISNNAEYGEYVTGP+VINE+SR+AM+ AL I+ GEYAK FI EG NYP
Sbjct: 241 GGIANMNYSISNNAEYGEYVTGPKVINEESRRAMKEALHNIRTGEYAKKFILEGVTNYPE 300
Query: 301 MTAYRRNNAAHQIEVVGEKLRTMMPWIAANKIVDKTKN 338
MTA RR A H IEVVG KLR+MMPWI AN+IVDKT+N
Sbjct: 301 MTARRRLMAEHPIEVVGAKLRSMMPWIKANQIVDKTRN 338
Lambda K H
0.317 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 466
Number of extensions: 7
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 338
Length adjustment: 28
Effective length of query: 310
Effective length of database: 310
Effective search space: 96100
Effective search space used: 96100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)
Align candidate WP_020564704.1 A3OW_RS0117285 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.32650.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.32650.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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