Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_020564706.1 A3OW_RS0117295 acetolactate synthase 3 large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_000372865.1:WP_020564706.1
Length = 578
Score = 788 bits (2036), Expect = 0.0
Identities = 380/565 (67%), Positives = 457/565 (80%), Gaps = 3/565 (0%)
Query: 18 EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
E+ GA+ILV +L +EGVEY++GYPGGAVL++YD L +Q +HILVRHEQ A HAADGYA
Sbjct: 2 ELSGAQILVQSLKDEGVEYIFGYPGGAVLHLYDALFQQEAIKHILVRHEQGATHAADGYA 61
Query: 78 RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
RATGK GV LVTSGPG TNA+TGIATAY+DSIP+VVI+G V IG DAFQE D +GI+
Sbjct: 62 RATGKPGVVLVTSGPGATNAITGIATAYMDSIPLVVISGQVSLPVIGSDAFQEVDMIGIS 121
Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACK--YEYPKSIDM 195
RP VKHNFLVKDV LA TIKKAF++A +GRPGPVVVD+PKD++ K Y+YPK I +
Sbjct: 122 RPCVKHNFLVKDVTKLAETIKKAFYVATSGRPGPVVVDVPKDITDPNIKVPYKYPKKISL 181
Query: 196 RSYNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLM 255
RSYNPV GH GQI+KAV LL AERP IY+GGGV+L AS EL + L +PVTNTLM
Sbjct: 182 RSYNPVVLGHKGQIKKAVDLLLSAERPIIYSGGGVILGEASRELTEFGRLLEYPVTNTLM 241
Query: 256 GLGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKII 315
GLG +PGT +QFVGMLGMHGTYEANMAM D++IA+GARFDDRV G F AR II
Sbjct: 242 GLGGYPGTDRQFVGMLGMHGTYEANMAMHESDLIIAVGARFDDRVTGKLDKFCPYAR-II 300
Query: 316 HIDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVD 375
HID+DP+SISK VKVDIPIVG VK VL+++I I+ S KP ++AL WW +I QW+SV+
Sbjct: 301 HIDVDPASISKTVKVDIPIVGEVKPVLEQMIELIRESKKKPNKKALEAWWSRINQWKSVN 360
Query: 376 CLKYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLG 435
CL YDR S +IKPQYV+E+++++TKG+A++ SDVGQHQMWAAQ+Y+FD+PR WINSGGLG
Sbjct: 361 CLDYDRESRLIKPQYVIEQLYDVTKGEAYVTSDVGQHQMWAAQYYRFDKPRHWINSGGLG 420
Query: 436 TMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMV 495
TMG GLP A+G+K AFPE +V +TGE SIQMCIQELST LQY+T VKI +LNN Y+GMV
Sbjct: 421 TMGFGLPAAIGVKLAFPEADVACVTGEASIQMCIQELSTALQYNTAVKIVNLNNRYMGMV 480
Query: 496 RQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFL 555
RQWQE Y++RYSHSYMD +PDFVKLAEAYGHVGMR++K DV AL +AF LKDRTVF+
Sbjct: 481 RQWQEFSYESRYSHSYMDTIPDFVKLAEAYGHVGMRIDKPEDVRGALEQAFALKDRTVFI 540
Query: 556 DFQTDPTENVWPMVQAGKGISEMLL 580
D TD TENV+PM++AGK ++M L
Sbjct: 541 DIMTDRTENVYPMIEAGKAHNDMKL 565
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1059
Number of extensions: 36
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 578
Length adjustment: 36
Effective length of query: 549
Effective length of database: 542
Effective search space: 297558
Effective search space used: 297558
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_020564706.1 A3OW_RS0117295 (acetolactate synthase 3 large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.18012.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18012.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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