Alignments for a candidate for trpE in Methylosarcina fibrata AML-C10

Align anthranilate synthase (subunit 1/2) (EC 4.1.3.27) (characterized)
to candidate WP_020565438.1 A3OW_RS0121060 anthranilate synthase component I

Query= BRENDA::P20580
         (492 letters)



>NCBI__GCF_000372865.1:WP_020565438.1
          Length = 495

 Score =  614 bits (1584), Expect = e-180
 Identities = 300/492 (60%), Positives = 384/492 (78%), Gaps = 1/492 (0%)

Query: 1   MNREEFLRLAADGYNRIPLSFETLADFDTPLSIYLKLADAPNSYLLESVQGGEKWGRYSI 60
           M  E+F + A +G+NRIP+  E LAD DTPLS YLKLAD   SYL ESV GGE+WGRYSI
Sbjct: 1   MTPEQFNQYAREGFNRIPIIREVLADLDTPLSAYLKLADGAYSYLFESVHGGEQWGRYSI 60

Query: 61  IGLPCRTVLRVYDHQVRISIDGVETERFDCADPLAFVEEFKARYQVPTVPGLPRFDGGLV 120
           IGLPC+TV+R+   Q+ +  +G + +     +PL ++E+FK  Y+VP +  LPRF+GGLV
Sbjct: 61  IGLPCQTVIRITGKQISLEKNGRKEQTITHENPLLWIEQFKEGYKVPDIAHLPRFNGGLV 120

Query: 121 GYFGYDCVRYVEKRLATCPNPDPLGNPDILLMVSDAVVVFDNLAGKIHAIVLADPSEENA 180
           GYFGY+ + Y+E RL     PDPLGNPDI+LMVS+ ++VFDNL+GK+  +  A+P EE A
Sbjct: 121 GYFGYETIGYIEPRLGNSRKPDPLGNPDIVLMVSEEMLVFDNLSGKLLLLTHANPEEERA 180

Query: 181 YERGQARLEELLERLRQPITPRRGLDLEAAQGREPAFRASFTREDYENAVGRIKDYILAG 240
           +ER +ARL EL  +LR+ +  R        +  E  F + FT++ +E+AV + KDYI  G
Sbjct: 181 FERAEARLSELARKLRE-VQARPARHPSPKKVNESDFVSGFTQQGFEDAVRKAKDYITDG 239

Query: 241 DCMQVVPSQRMSIEFKAAPIDLYRALRCFNPTPYMYFFNFGDFHVVGSSPEVLVRVEDGL 300
           D MQVV SQR+SI + A P++LYRALRC NP+PYM++ N GDFH+VGSSPE+LVR+ED +
Sbjct: 240 DIMQVVLSQRLSIPYTAEPLNLYRALRCLNPSPYMFYLNLGDFHIVGSSPEILVRLEDNI 299

Query: 301 VTVRPIAGTRPRGINEEADLALEQDLLSDAKEIAEHLMLIDLGRNDVGRVSDIGAVKVTE 360
           VTVRPIAGTR RG  +E DLALE++LL+D KEIAEHLMLIDLGRND GRV++IG+V++T+
Sbjct: 300 VTVRPIAGTRRRGATQEQDLALEKELLADPKEIAEHLMLIDLGRNDAGRVAEIGSVQLTD 359

Query: 361 KMVIERYSNVMHIVSNVTGQLREGLSAMDALRAILPAGTLSGAPKIRAMEIIDELEPVKR 420
           KM++ERYS+VMHIVSNV G+L+ G +A D L A  PAGT+SGAPKIRAMEIIDELEPVKR
Sbjct: 360 KMIVERYSHVMHIVSNVIGRLKPGKNAFDVLAATFPAGTVSGAPKIRAMEIIDELEPVKR 419

Query: 421 GVYGGAVGYLAWNGNMDTAIAIRTAVIKNGELHVQAGGGIVADSVPALEWEETINKRRAM 480
           GVY GA+GY+AW+GN+DTAIAIRTAVIKN  LH+QAG GIV DS+P  EW+ET+NK RA+
Sbjct: 420 GVYSGAIGYIAWSGNLDTAIAIRTAVIKNNMLHIQAGAGIVYDSIPRNEWDETMNKGRAI 479

Query: 481 FRAVALAEQSVE 492
           FRAV++AE  +E
Sbjct: 480 FRAVSMAEAGLE 491


Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 727
Number of extensions: 21
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 495
Length adjustment: 34
Effective length of query: 458
Effective length of database: 461
Effective search space:   211138
Effective search space used:   211138
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)

Align candidate WP_020565438.1 A3OW_RS0121060 (anthranilate synthase component I)
to HMM TIGR00564 (trpE: anthranilate synthase component I (EC 4.1.3.27))

Software error:

../bin/blast/fastacmd -i /tmp/list.32332.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.32332.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.