Alignments for a candidate for asp-kinase in Methylohalobius crimeensis 10Ki

Align aspartate kinase (EC 2.7.2.4) (characterized)
to candidate WP_022947281.1 H035_RS0101685 aspartate kinase

Query= BRENDA::O69077
         (412 letters)



>NCBI__GCF_000421465.1:WP_022947281.1
          Length = 408

 Score =  564 bits (1454), Expect = e-165
 Identities = 293/409 (71%), Positives = 344/409 (84%), Gaps = 3/409 (0%)

Query: 1   MALIVQKFGGTSVGTVERIEQVAEKVKKFREAGDDVVVVVSAMSGETNRLIGLANQIMEQ 60
           MAL V K+GGTSVGTVERI+ VAEK+ + + AGDD+VVVVSAMSGET+RL+GLA+Q+ E+
Sbjct: 1   MALYVHKYGGTSVGTVERIQDVAEKIIQAKRAGDDLVVVVSAMSGETDRLLGLAHQVQER 60

Query: 61  PVPRELDVMVSTGEQVTIALLSMALIKRGVPAVSYTGNQVRILTDSAHTKARILHIDDTH 120
           P PRELDV+++TGEQVTIALL MAL  +G  A SYTG Q RILTD+AHTKARIL ID + 
Sbjct: 61  PEPRELDVLLATGEQVTIALLCMALEVKGCAASSYTGAQARILTDAAHTKARILDIDTSR 120

Query: 121 IRADLKAGRVVVVAGFQGVDGNGNITTLGRGGSDTTGVALAAALKADECQIYTDVDGVYT 180
           IR DL   +VVVVAGFQGV+  G+ITTLGRGGSDTT VALAA L+ADEC+IYTDVDGVYT
Sbjct: 121 IRRDLSQDKVVVVAGFQGVNEEGHITTLGRGGSDTTAVALAATLQADECRIYTDVDGVYT 180

Query: 181 TDPRVVPQARRLDKITFEEMLEMASLGSKVLQIRAVEFAGKYNVPLRVLHSFQEGPGTLI 240
           TDPR+  +ARRL++ITFEEMLE+ASLGSKVLQIRAVEFAGKYNVPLRVL +F EG GTLI
Sbjct: 181 TDPRIESKARRLERITFEEMLELASLGSKVLQIRAVEFAGKYNVPLRVLSTFTEGEGTLI 240

Query: 241 TIDDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISAANVEVDMIVQNVA 300
           T +D  E+ME+ +ISGIAFNRDEAKLT+ GVPD PG+A  ILGPI+ AN+EVDMIVQNVA
Sbjct: 241 TYED--ETMEEALISGIAFNRDEAKLTVEGVPDRPGIAAAILGPIADANIEVDMIVQNVA 298

Query: 301 HDNTTDFTFTVHRNDYLNALEILKQTAANIGAREAIGDTNIAKVSIVGVGMRSHAGVASR 360
            D +TDFTFTVHRNDY  A +IL +   ++GAR+  GD  I K+S+VGVGMRSHAG+AS+
Sbjct: 299 EDESTDFTFTVHRNDYPRARDILDRARDDLGARKVTGDDRIVKISLVGVGMRSHAGIASK 358

Query: 361 MFEALAKESINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELD-APA 408
           MF  LA+  INIQMISTSEIK+SVV++E YL+ AV  LH AFELD APA
Sbjct: 359 MFRVLAEAGINIQMISTSEIKISVVLDEDYLQAAVHTLHEAFELDQAPA 407


Lambda     K      H
   0.317    0.133    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 555
Number of extensions: 16
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 408
Length adjustment: 31
Effective length of query: 381
Effective length of database: 377
Effective search space:   143637
Effective search space used:   143637
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)

Align candidate WP_022947281.1 H035_RS0101685 (aspartate kinase)
to HMM TIGR00657 (aspartate kinase (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.12384.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.12384.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.