Alignments for a candidate for hisC in Methylohalobius crimeensis 10Ki

Align histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) (characterized)
to candidate WP_022947856.1 H035_RS0104755 histidinol-phosphate transaminase

Query= metacyc::BSU22620-MONOMER
         (360 letters)



>NCBI__GCF_000421465.1:WP_022947856.1
          Length = 376

 Score =  287 bits (734), Expect = 4e-82
 Identities = 160/359 (44%), Positives = 211/359 (58%), Gaps = 9/359 (2%)

Query: 10  LKPYQPGKPIEAVKSEYGLD--KVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGYSA 67
           L PYQPGKPIE +  E GLD  ++VKLASNENP G S  A  A+   + + A YPDG   
Sbjct: 16  LTPYQPGKPIEELARELGLDPARIVKLASNENPLGPSPGALSAVQMALSESARYPDGNGF 75

Query: 68  ALRTRLSKHLNVSETSLIFGNGSDEIIQIICRAFLNDKTNTVTAAPTFPQYKHNAVIEGA 127
            L+ +L+  L V    +  GNGS++++ ++ RAFL    + V A   F  Y  +    GA
Sbjct: 76  KLKQKLAARLGVEMAQITLGNGSNDVLDLVARAFLGPGRSAVFAQHAFAVYPISTQAVGA 135

Query: 128 EVREIALRPDGS------HDLDAMLEAIDEQTQVVWICSPNNPTGTYTSEGELLAFLERV 181
             R IA   DGS      HDL  ML  + E T VV+I +PNNPTG++    EL  FLE +
Sbjct: 136 AAR-IAPAHDGSRGPRYGHDLAGMLARVAEDTSVVFIANPNNPTGSWVGADELEDFLEAL 194

Query: 182 PSRVLVVLDEAYYEYVTAEDYPETVPLLSKYSNLMILRTFSKAYGLAALRVGYGIADENL 241
           P RV+ VLDEAY+EY    DYP+T+P L ++ NL+I RTFSKAYGLA  RVGYGI+   +
Sbjct: 195 PERVIAVLDEAYFEYAEGNDYPDTLPWLDRFPNLIITRTFSKAYGLAGFRVGYGISRPEV 254

Query: 242 IRQIEPAREPFNTSRLGQAAAIAALDDQAFIASCVEQNNAGLQQYYDFAKTHGLKCYPSQ 301
              +   R+PFN + L  AAA AALDD+A++ S  E N AGL Q  +  +  GL   PS 
Sbjct: 255 ADLLNRVRQPFNVNSLALAAAEAALDDEAYLQSSREMNRAGLAQLTEAFRARGLAFIPSA 314

Query: 302 TNFVLIDFKRPADELFQALLEKGYIVRSGNALGFPTSLRITIGTKEQNEEILAILAEIL 360
            NFV +D  R A  +F ALL +G IVR       P  LR+++GT+ +N   +  L  +L
Sbjct: 315 GNFVTVDVGRDAGPVFDALLREGVIVRPLAGYALPDHLRVSVGTRAENGVFIEALDRVL 373


Lambda     K      H
   0.317    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 348
Number of extensions: 14
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 376
Length adjustment: 30
Effective length of query: 330
Effective length of database: 346
Effective search space:   114180
Effective search space used:   114180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)

Align candidate WP_022947856.1 H035_RS0104755 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.5572.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.5572.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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