Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_022948102.1 H035_RS0106030 phosphoribosyl-ATP diphosphatase
Query= reanno::Marino:GFF3253
(109 letters)
>NCBI__GCF_000421465.1:WP_022948102.1
Length = 109
Score = 134 bits (337), Expect = 3e-37
Identities = 68/107 (63%), Positives = 88/107 (82%), Gaps = 6/107 (5%)
Query: 4 VLENLARVLEARKEADPETSYVASLHAKGLNKILEKVGEECTETLLAAKDAEHSGETRD- 62
+LE LA VLE RK ADPETSYVASL+AKG++ IL+K+GEE TET++AAK GE R+
Sbjct: 7 ILEELAEVLEKRKHADPETSYVASLYAKGMDGILKKIGEEATETVIAAK-----GENREQ 61
Query: 63 VVYETADLWFHSMVMLSRLGLGPKDILDELASRFDLSGLEEKASRNK 109
++YETADLWFH++V+L+ GLGP+++L EL RF LSGLEEKA+RN+
Sbjct: 62 LIYETADLWFHTLVLLAHQGLGPENVLAELKRRFGLSGLEEKAARNQ 108
Lambda K H
0.312 0.129 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 109
Length adjustment: 12
Effective length of query: 97
Effective length of database: 97
Effective search space: 9409
Effective search space used: 9409
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 40 (20.0 bits)
Align candidate WP_022948102.1 H035_RS0106030 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.28289.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.28289.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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